Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00895 ATGGGGATCCCTGGATTGAGCAATCAGAATAATGGGCAGCAAAGATTAGGCATAACTGAGCCCATTTCATTGGCTGGACCAACTGATGATGATGCGATCAAGACGCTTGAACTTGAGAAGTACTTGCAAGGTGTTGGATTGTACGAGAGTCAGGAGGAGGCTGTAGTAAGGGAGGAAGTGCTTGGCAGGCTGGACCAGATTGTGAAGATTTGGGTTAAGAACATCAGCCGGGCAAAGGGGTTCAATGAACAACTGGTGCATGAAGCAAACGCCAAGATTTTCACCTCCGGCTCTTATCGGTTAGGGGTGCATGGCCCTGGAGCTGATATAGATACTCTTTGTGTGGGACCTAGACATGCATCCAGAGATGAAGATTTCTTTGGTGGGCTACAGAAGATGCTATCTGAGATGCAAGAAGTAACAGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGGTGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTAGCGTTGTGGGTTATTCCTGAAGATTTAGATATATCACAGGAATCAATATTACAAAGTGTTGACGAACAAACTGTTCTTAGTCTTAATGGTTGTAGAGTAACTGACCAGGTCCTGCGATTGGTTCCAAATATTCAGACCTTTCGCACGACATTGAGATGCATGAGGTTTTGGGCCAAGCGTCGTGGTGTTTATTCAAATGTTGCAGGTTTTCTTGGTGGTATAAACCTAGCATTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTTCCTGATATGTTAGTGTCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTACCAGTTTGGGATCCTAGAAGAAATCCCAAGGATAGATATCATCTAATGCCTATAATTACTCCTGTTTATCCCTGCATGAACTCCACTTACAATGTGACATCAAGTACATTGCGTGTTATGTCAGATGAGTTTCGGAGGGGAAGTGAAATATGTGAGGCTATGGAGGCTAGCAAGGCTGATTGGGATACCCTTTTTGAGCCTTATCCCTTTTTTGAATCATACAAGAATTATCTACAGATAGACATAACAGCAGAGAATGCAGATGACCTTAGACAATGGAAAGGCTGGGTTGGGTCTCGTCTCCGGCAGTTGACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGTCATCCACATCCTGGTGAATTCTCAGACAATTCTAGACCTTTTCACCACTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGTTAACTGTTGAAGAATTTAAACATTCTGTCAACGCTTACACTCTATGGAAACCTGGAATGGATATCCATGTGTCCCATGTGAAACGCAGTAACATTCCTAACTACATATTTCCTGGTGGTGTGCGACCTACCTTCCCATCAAAAGTAACTGCCGAGAATAAACAGAGTTCCAAATCAAGGGCTTCTGGCCATGGTCAAACAGAAAAGCCTCAAGGAGGTAAAGCTGTTGCAGTTGGAGCAGATGATGTGAGGAAGAGAAAGAGATCAGAGGACAACATGGATAATAACCCAAGGAATTCCAGGTCCCCTGTATCTTTACCTCCCCCCAGCAGGGAAGTTCATGAAGATATATCTCCTATTAGTGCTTCAAGTTCTTGTTCTATGAAATTTGATGAATCAGAAGTGAATAGTATTGGTGGACAAAAGAGCGAGAAACTTTGTCTGAAATCTCCAGGTGAGATTCCTTCTGGGGATAGTGGGACCAATGGATCAGTGACAAGCAACCAACAAGTGAACCCTGTACTTGCAGCTGCTGATACATCTAATTCTAAAGAAGAAGAAAAGCTAGCCATTGAAAAGATTATGTCCGGTCTGTATGATGCACATCAAGCCTTTCAAGAAGAACCCAAAGAGCTTGAAGATAATACTCAATATAAAAATCAAGACAAAGATTCTAGTGCGAACATGAAAAACAACATGGAATCTTTAGACTCAAAGCCTGCAGTGCCAGAAGAGCCAGTTATTTCTAAGGAAATTACTTGTTCAACTCATTTATGCTCCAATGAGAGCTTGGAGGAGCTTGAGCCTGCTGAGCTAACAGCACCATTGTTAAGTGGGCCTCCTGCACCTGTACCAATGAAGAAGCCGCTTATCAGGTTGAACTTCACCTCCTTAGGCAAAGCTACCGACAAAAGTGTTTAA 2274 0.4283 MGIPGLSNQNNGQQRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRNSRSPVSLPPPSREVHEDISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEIPSGDSGTNGSVTSNQQVNPVLAAADTSNSKEEEKLAIEKIMSGLYDAHQAFQEEPKELEDNTQYKNQDKDSSANMKNNMESLDSKPAVPEEPVISKEITCSTHLCSNESLEELEPAELTAPLLSGPPAPVPMKKPLIRLNFTSLGKATDKSV 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00895 757 MobiDBLite consensus disorder prediction 672 686 - -
Gma07g00895 757 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Gma07g00895 757 MobiDBLite consensus disorder prediction 656 697 - -
Gma07g00895 757 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 718 - -
Gma07g00895 757 MobiDBLite consensus disorder prediction 530 546 - -
Gma07g00895 757 Pfam Poly(A) polymerase predicted RNA binding domain 364 423 IPR007010 GO:0003723|GO:0043631
Gma07g00895 757 MobiDBLite consensus disorder prediction 1 18 - -
Gma07g00895 757 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Gma07g00895 757 MobiDBLite consensus disorder prediction 568 591 - -
Gma07g00895 757 MobiDBLite consensus disorder prediction 606 630 - -
Gma07g00895 757 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Gma07g00895 757 MobiDBLite consensus disorder prediction 499 517 - -
Gma07g00895 757 CDD NT_PAP_TUTase 56 211 - -
Gma07g00895 757 PANTHER POLY A POLYMERASE 1 718 - -
Gma07g00895 757 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Gma07g00895 757 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Gma07g00895 757 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 362 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gma07g00895 757 MobiDBLite consensus disorder prediction 1 22 - -
Gma07g00895 757 MobiDBLite consensus disorder prediction 497 635 - -
Gma07g00895 757 MobiDBLite consensus disorder prediction 656 671 - -
Gma07g00895 757 Gene3D - 17 359 - -
Gma07g00895 757 Pfam Nucleotidyltransferase domain 77 160 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00895 Gma-Chr7 9701243 9712804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00895 K14376 - gmx:100815801 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00895 07 9701243 9712804 Gma08g00480 08 4003713 4005500 ECH
Gma07g00895 07 9701243 9712804 Gma07g00895 07 9701243 9712804 ECH