Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00113 ATGGAAAATCCTGACGTTGAAAAGTCTGAAGAAACCAATAGACAAATTGACAGTAACACAAAATCTAATTCTAAACAGCAGAGCGTAGAGAAAGCTAATGAACACCCTGATTGGTTACCTGATGGCTGGAACGTGGAAGTCAGAACCCGTAAAAGTGGTGTACACATGGGATCTGGATATAAGTGTTACATTGAGCCATTGAAAGGATACAAATTCTTCTCCAAACCGGAGGTATTACGATATCTCGAAACTGTAAAGgacaacagttgcacttccaagaaggggaagaaatgcagtaacatgcattctccaaaacacaacagttgcacctccaagaaggagaagaaatgcagtaacatgcattctccaaacgacaacaattgcacttccaagaaggagaagaaatgcactaacatggattctccagacgacaacagttgcactctcaagaaggagaagaattgcagtaacatggattctccaaacgacaaaagttgcacttccaagaaggagaagaattgcagtaacttggattctccaaacgataacagttgcactctcaaggagaagaattgcggtaacatggattctccaaacaacaacagtttcactcccgagaaggagaagaattgctgtaacatggattctccaatcgacaacagttgctcttccaagaagaagaattgcagtaacatggattctccaaCCGATGTTGTGGTTGAGAAGTCTACTGTGGAGGATTTACCACCTGGATGGGTGAAAGAATTAAAGATTAGGAAGAACAGCAAGGGCATTCGGAAAGATCCGTTTTATATAGATCCAGCGAGTGGATATGTATTCCGTTCCAAGAAGGATGTACTTCGGTATCTTGAATCTGGTGATATACGTTCATGTGCATTTAAGCCAAGTAGAAGACAAGTCCAAGATGAAGACAATTTAACTCCACCACCTGCTGCCAAGAGACAGAAACTGAAGCAGTCTGCACCCGAACAACAGCTTTCTTCAGCCACAGAAATTCTTGATAAAAGCAACTTAGAATTGCTAGATGCTAACAGCTCAAGGAAAGGGAAAAATGCAAATGTGTCATCTGGAATGATGGTTGCTTCTGTTCCCATGGGTGAATCTGTTGAAAAGATGCATTCACTGGAGGATGGAGCTGCAAACTCTTCTGAATTGAAGAAAACATCTGACCCAAGTAGCTCAGCACTTTTGAATGAATCCTTGAAAGAATCAGAACAAGTACTTTCTGCAGATGATGTGCAAGAGAAGGAGCATGTTGTGAATATGATGGAGAATGCTATTGAAAAGAATCACAGTAACTATAGCATATCCAAAAACAGGAAGGAGTTCAATGTACCTCACCGGTCATCACCAAGACTTGCTGGAAGTAAACCTGTCCAGTTGGCCAACAATGTGATGAATGAACAGACTCTCCAGGTTCCTAAAAGAAACTTGAGGAAAAGTAGAAACACTCTAGATATTGATATTTCTGAAGACCAAACAGTTTCTAAGGAACAACCGCATCAGCAAGAAGCAGATAAAATAGAAGACAAAAAGCCAGAAATTCAAATTAGCTCAAACAAATCAAGTAAAAAGAAAGAGTACCACCTTCCTCGTCGGGCTTCAAAACGATTAGCTGCAATTGAACATGAGTCAATGAACTCCAAAGCAAAATTGCAGCAAAGTGAGTGTGGGCCAGTTACAGTGCTTGCAGATCAAGCACCAACAAATGGAAAGTCAGCAAATAAAAGGAAAAAATCAGAACCTCAGCTGGGGAAACGTGAAAATGAAGAAATGGAGGATGAGAAATCAGAATCTCAGCTGTCCTTTGCATTTCACTACTCCTGGTCTGACCCAAGTTTGGAATATGCAATCAATACCCTCACTGgaaGAAGCGGAGGCAGTGAAAACAATTTGCTTGACACTGTTGCAGGAAGCAGGGACAGAAAATCCCAGGCACGTTCAAATAAACCCAAGAAAAAGAAAGAGGTCAAAGTACCTATGCGATTATCAAAGCGACTTGCTGGCCTTGAACCTGAGGTACTGCCTGCTGAAAGAGCTCTTGAATATTCGACTAGAAAATCATGCAAAGAAGAACCAACTGCAACTGCTACTTTAACTAATGGAGTGTCTGACCATCACGATGCTGGGGAAGAAACCAAGCTTACTCCTCAAGCTTCTGACAGTTTGAAAACAGAAGTACTAGGAGAATCATTAAACCAGAGTGAGAAGTCATATGATGCCCAAACTGGTCACAAGGAACAATTGCAGAAAGTTGAAGCTGAAAATATTGGGGATGCAAGATCAGAGCCACAGCTCCCCTTACCGTTTGGGAACTCTTGGTCAGATCCATGCCTAGAATTTGCAATCAAGACTCTCACTGGTGCTTTGCCAGTTGATGCTGGTGACATTATGCCCGCTTTGCCTCCTGGCTTTGATAATCCGCCATATAAGCAATTGCATGGGAATGTGGTGACAAGCATTAATCAAGAAGCTCACGATAACTCAAACCAATCACAGAACAAGAAAGAGCTTAATATGGTTAGCCAGCTTGTGTTGAGGTCCAGTTCCACCTCTTATGAAAATGCTCCCAAATTTACAACTAGACAGTCTTATCTTGATCAAGGCAACATAATAGGGAATTTGAATGAAGAACCCCGTCACACTGGAAACATAACACCTCCTGTGCATCATTCTAGGAATATAAACTCACTAACACATGAAGAGCCATTAAAGCAAAATGGACAGGTTGTCGAGGGTGGATTTGTTACAACGGAGCAACAACTATTTGAAACTGGAACGGAACCTGTTAACTATCATGAACGAAGGGATGGTGGCTCAATGTTGCCAGATTTAGGATCTTCCTGCTTTTCTCAAAGTGATTTTTCGTTTCTCCATGATACAGGGGTTAAGTCCATGCCGGGGCAGCAGCCATCAATAAGTTCTTCATTCCTACCGTTGGAAAAAACGAGCCTGCAAGGTTTCGCTGGCGTTGATCCTCAAACACAGTTTTCTCAGTGCAACAATAATTTTCAAAGAAGGTAA 3045 0.3547 MENPDVEKSEETNRQIDSNTKSNSKQQSVEKANEHPDWLPDGWNVEVRTRKSGVHMGSGYKCYIEPLKGYKFFSKPEVLRYLETVKDNSCTSKKGKKCSNMHSPKHNSCTSKKEKKCSNMHSPNDNNCTSKKEKKCTNMDSPDDNSCTLKKEKNCSNMDSPNDKSCTSKKEKNCSNLDSPNDNSCTLKEKNCGNMDSPNNNSFTPEKEKNCCNMDSPIDNSCSSKKKNCSNMDSPTDVVVEKSTVEDLPPGWVKELKIRKNSKGIRKDPFYIDPASGYVFRSKKDVLRYLESGDIRSCAFKPSRRQVQDEDNLTPPPAAKRQKLKQSAPEQQLSSATEILDKSNLELLDANSSRKGKNANVSSGMMVASVPMGESVEKMHSLEDGAANSSELKKTSDPSSSALLNESLKESEQVLSADDVQEKEHVVNMMENAIEKNHSNYSISKNRKEFNVPHRSSPRLAGSKPVQLANNVMNEQTLQVPKRNLRKSRNTLDIDISEDQTVSKEQPHQQEADKIEDKKPEIQISSNKSSKKKEYHLPRRASKRLAAIEHESMNSKAKLQQSECGPVTVLADQAPTNGKSANKRKKSEPQLGKRENEEMEDEKSESQLSFAFHYSWSDPSLEYAINTLTGRSGGSENNLLDTVAGSRDRKSQARSNKPKKKKEVKVPMRLSKRLAGLEPEVLPAERALEYSTRKSCKEEPTATATLTNGVSDHHDAGEETKLTPQASDSLKTEVLGESLNQSEKSYDAQTGHKEQLQKVEAENIGDARSEPQLPLPFGNSWSDPCLEFAIKTLTGALPVDAGDIMPALPPGFDNPPYKQLHGNVVTSINQEAHDNSNQSQNKKELNMVSQLVLRSSSTSYENAPKFTTRQSYLDQGNIIGNLNEEPRHTGNITPPVHHSRNINSLTHEEPLKQNGQVVEGGFVTTEQQLFETGTEPVNYHERRDGGSMLPDLGSSCFSQSDFSFLHDTGVKSMPGQQPSISSSFLPLEKTSLQGFAGVDPQTQFSQCNNNFQRR 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00113 1014 MobiDBLite consensus disorder prediction 301 339 - -
Gma08g00113 1014 SUPERFAMILY DNA-binding domain 247 297 IPR016177 GO:0003677
Gma08g00113 1014 MobiDBLite consensus disorder prediction 629 666 - -
Gma08g00113 1014 PANTHER OS04G0193200 PROTEIN 2 631 - -
Gma08g00113 1014 PANTHER OS04G0193200 PROTEIN 635 1007 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 1 15 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 127 150 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 1 42 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 388 405 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 486 532 - -
Gma08g00113 1014 Gene3D - 4 138 - -
Gma08g00113 1014 Gene3D - 210 339 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 386 405 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 571 606 - -
Gma08g00113 1014 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 106 IPR001739 GO:0003677
Gma08g00113 1014 MobiDBLite consensus disorder prediction 629 645 - -
Gma08g00113 1014 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 238 305 IPR001739 GO:0003677
Gma08g00113 1014 MobiDBLite consensus disorder prediction 90 180 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 579 606 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 692 732 - -
Gma08g00113 1014 PANTHER OS04G0193200 PROTEIN 2 631 IPR038945 -
Gma08g00113 1014 PANTHER OS04G0193200 PROTEIN 635 1007 IPR038945 -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 482 539 - -
Gma08g00113 1014 MobiDBLite consensus disorder prediction 325 339 - -
Gma08g00113 1014 Pfam Methyl-CpG binding domain 248 294 IPR001739 GO:0003677
Gma08g00113 1014 Pfam Methyl-CpG binding domain 33 101 IPR001739 GO:0003677
Gma08g00113 1014 SUPERFAMILY DNA-binding domain 24 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00113 Gma-Chr8 979947 985667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00113 - - gmx:100807457 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00113 08 979947 985667 Gma08g00113 08 979947 985667 ECH
Gma05g02010 05 41437625 41443779 Gma08g00113 08 979947 985667 GST
Gma01g02183 01 57103621 57105730 Gma08g00113 08 979947 985667 PCT