Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02183 ATGGGAAAACCCCGAGATGAGAAGTCCGAAGCAACCAATACACATATCAGCAGTAGCACAATAGGCAATTCTAAACAGGCTATAGAGAAATCAAATGAACATCCTGAATGGTTACCTGGTGGCTGGAATGTGTGGACTTCAGAAAACTCGAAAAAGTGGTGCAAATATGGGTCATGGTGTTACATTGCTCCAAGTGGACACAAATTCTACTCCAAACCAGAGGTGTTACGATATCTCGAGACTGTAAACAGCTACAGTCACACTTCCAAGAAGGAAAAGATATGCAAAAGCAATGTTTTTGAGGATTCAGTTGATAATGGACATGCTAGGATTTCTGAAACTGATATATCTCCCAAAAATAAGTTGGCTGAGAATGTTACAGGAATCAGCAATGACAAAAACTCACGTGTAAATTCAAAGAAATCCAAGAACAAGAAAGAGCTTACAATGCCTAGGCGGTTGTCACAGCGACTTGCTGGCCATGAACCTGAGGTACTGCTTACTGAAAAAGCTATTAAATATGCCACTAGAAAATTCTGCAATGACAAGCCAGCTACTACTGAGATTTTAACTAATGGAGTGTCTGGGCATCTTCATATCCGGGAAGAATCCAAGCTTGTTCTGCAGGCATCTGACAGGTTGAAAACATTATATGGTGAATCATCAAGCAAGAGTGACAAGTCATATGATCCCCAAACTGTTCCCAATGAACAACTGCAGAGGCTTGAAGCTGAAAATGTTGCTGATGACAGATCAGATCCACTGTTCCCCACACCTTTTGGGGACTGGTCACATCCGTGCCTAGAATTTGAAATTGAGACTCTTTCTGGTGCGTTGCTAGTTGATGCTCCCACTGCCACTGCTGCTGCTGGCATTTTGCCTGTTATGACTCCTGATGTTAATGCCCCAGCAAATAAGGAATTACTTGATAACCCCAACCAATCCCAGACCAAGAAAGAGTTTAGTACTGTTTGCAAGCCATCGAACAAATTCTGGACCAGTTCGAGTTGA 1011 0.4233 MGKPRDEKSEATNTHISSSTIGNSKQAIEKSNEHPEWLPGGWNVWTSENSKKWCKYGSWCYIAPSGHKFYSKPEVLRYLETVNSYSHTSKKEKICKSNVFEDSVDNGHARISETDISPKNKLAENVTGISNDKNSRVNSKKSKNKKELTMPRRLSQRLAGHEPEVLLTEKAIKYATRKFCNDKPATTEILTNGVSGHLHIREESKLVLQASDRLKTLYGESSSKSDKSYDPQTVPNEQLQRLEAENVADDRSDPLFPTPFGDWSHPCLEFEIETLSGALLVDAPTATAAAGILPVMTPDVNAPANKELLDNPNQSQTKKEFSTVCKPSNKFWTSSS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02183 336 Gene3D - 1 157 - -
Gma01g02183 336 MobiDBLite consensus disorder prediction 302 322 - -
Gma01g02183 336 MobiDBLite consensus disorder prediction 307 322 - -
Gma01g02183 336 MobiDBLite consensus disorder prediction 136 151 - -
Gma01g02183 336 MobiDBLite consensus disorder prediction 130 151 - -
Gma01g02183 336 MobiDBLite consensus disorder prediction 1 37 - -
Gma01g02183 336 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 107 IPR001739 GO:0003677
Gma01g02183 336 MobiDBLite consensus disorder prediction 13 28 - -
Gma01g02183 336 SUPERFAMILY DNA-binding domain 32 87 IPR016177 GO:0003677
Gma01g02183 336 Pfam Methyl-CpG binding domain 29 84 IPR001739 GO:0003677
Gma01g02183 336 PANTHER OS04G0193200 PROTEIN 110 283 IPR038945 -
Gma01g02183 336 PANTHER OS04G0193200 PROTEIN 3 98 IPR038945 -
Gma01g02183 336 PANTHER OS04G0193200 PROTEIN 110 283 - -
Gma01g02183 336 PANTHER OS04G0193200 PROTEIN 3 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02183 Gma-Chr1 57103621 57105730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02183 - - gmx:106799024 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02183 01 57103621 57105730 Gma05g02010 05 41437625 41443779 PCT
Gma01g02183 01 57103621 57105730 Gma08g00113 08 979947 985667 PCT