Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02010 ATGGAAAATCCTGAAGTTGAAAAGTCTGAAGAAACCAATAGACAAATTGACAACACAAAATCTAATTCTAAACAGCAGAGCGTAGATAAAGCTAATGAACACCCTGATTGGTTACCTGATGGCTGGAACGTGGAAGTCAGAACCCGTAAAAGTGGTGTACACATGGGATCTGGATATAAGTGTTACATTGAGCCATTGAAAAGATACAAATTCTTCTCCAAACCAGAGGTATTACGATATCTCGAAACTGTAAAGgacaacagttgcacttccaagaaggggaagaaatgcagtaacatgcattctccaaaacacaacagttgctcttccaagaaggagaagaaatgcagtaacatgcattctccaaacgacaacaatagcacttccaagaaggagaagaaatccactaacatggattctccaaacgacaacagttgcactctcaagaaggagaagaattgcagtaacgtggattctcccaacgacaacagtttcactcccaagaaggagaagaattgcagtaacatggattgtccaaacgacaacagttgcactcccaagaaggagaagaattgcagtaacatggattctccaaatgacaacagttgcactcccaagaaggagaagaattgcagtaacatggattctccaaCTGATGTTGTGGTTGAGAAGTCTACTGTGGAGGATTTACCACCTGGATGGGTAAAAGAATTAAAGATTAGGAAGAACAGCAAGGGCATTCGAAAAGATCCGTTTTATATAGATCCAGCGAGTGGATATGTATTCCGTTCTAAGAAGGATGTACTGCGGTATCTTGAATCTGGTGATATACGTTCATGTGCATTTAGGCCAAGTAGAAGACAAATTCAAGATGAAGACAATTTAACTCCACCACCTGTTGCCAAGAGACAGAAACTGAAGCAGTCTGCATCTGAACAACAGCTTTCTTCAGCCACAGAAATACTTGATAAAAGCAGCTTAGAATTGCTAGATGCTAACAGCTCAAGGAAATGGAAAAATGCAAATGTGTCATCTGGAACGATGGTTGCTTCTGTTCCCATGGGTGAATCTGTTGTAAAGATGCATTCACTAGAGGATGGAGCTGCAAACTCTTCTGAAGTGAAGAAAACATCTGACCCAGGTAGCTCAGCACTTTTGAATGAATCCTTGAAAGAATCAGAAGAAGTACTTTCTGCAGATGATGTGCAAGAAAAGGAGCATGTTTTGAATGTGATGGAGAATGCTAATGAAAAGAATCACGGTAACCATAGCATATCCAAAAACAGGAAGGAGTTCAATGTACCTCACCGGTCATCACCAAGACTTGCTGGAAGTAAACCTGTCCAGTTGGCCAACAATCTGATCAATGAACGGACTCTTCAGGTTCCTAAAAGAAACTTGAGGAAAAGTAGAAACACTCTAGATGTTGATATTTCTGAAGACCAAACAGTTTCTAAAGATCAACCACATCAGCAAGAAGCAGATAAAATAGAAGACAATAATAAGCCAGAAATTCAAATTAGCCCAAACAAATCAAGTAAAAAGAAAGAGTACCACCTTCCTCGTCGGGCTTCAAAACGATTAGCTGCAATTGAACATGAGACAATGAACTCCAAAGCAAAATTGCAGCAAAGTGAGTGTGGGCCAGTTACAGTGCTTGCAGATCAAGCGCCAATAAATGGAAAGTCAGCAAATAAAAGGAAAAAATCAGCACCTCAGCTGGAGAAACGCGAAAATGAAGAAATGGATGATGAGAAATCAGAATCTCAGCTGTCCTTTGCATTTCACTACTCTTGGTCTGACCCAAGCTTGGAATATGCAATCAATACCCTCACTGgaagCAGAGACAGTGAAAACAATTTGCTTGACACTGTTACAGGAGGCAGCGACAGAAAATCTCAGGTACGATCAAATAAACCCCAGAGAAAGAAAGAGGTCAAAGTACCTATGCGGTTATCAAAGCGACTTGCTGGCCTTGAACCTGAGGTAGCGCCTGCTGAAAGAGCTATTGAATATTCGACTAGAAAATCATGCAAAGAAGAACCAACTGCGACTGCTACTTTAACTAATGGAGTGTCTGACCATCATGATGCTGGGGAAGAAACTAAGCTTACTCCGCAAGCTTCTGACAGTTTGAAAACAGAAGTACTAGGAGAATCATTAAACCAGAGTGGGAAGTCATGTGATGCCCAAACTGGTGACAAGGAACAATTGCAGAAAGTTGAAGCTGAAAATATTGGTGATGCAAGATCAGAGCCACAGCTCCCCTTACTGTTTGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCGATCAAGACTCTCACTGGTGCTTTGCCTGTTGATGCGGGTGACATTATGCCCGCTTTGCCTCCTGGCTTTGATAATCCACCATATAAGCAATTGCATGGGAGTCTGGCGACAAGCATTAATCAAGAAGCTCACGATAACTCAAACCAATCCCAGAACAAGAAAGAGCTTAATATGGTTAGCCAACCTGTGTTGAGGACCAGCTCCACCTCTTATGAGAATGCTCCCAAATTTACAACTAGAGTCTCTTATCTTGATCAAGGCAACATAATAAGGAATTTGAATGAAGAACCTCGTCACACTGGAAACACAACACCACCTGTGCATCATTCTAGGAATATAAACTCACTAACACATGAAGAGCCATTAAAGCAAAATGGACAGTTTGTCGAGGGTGGATTTGTTACAATGGGGCAACAACTATTTGAAACTGGAACTGTAAACCATGATAATTCTGAATCACAGTATAGTGCTCCGTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGCGTGATACCAGTAGAGGAAAATTTAACACTTCAAGGATGTTTCCAGGAACCTGTTAACTATCATGAACGAAGGGATGGTGGCTCAATGTTGCCAGATTTAGGATCTTCCAGCTTTTCTCAAAGTGATTTCTCATTTCTCCATGATACAGGGGTTAAGTCCATGCCGGGGAAGCAGTCATCAATGAGCTCTTCATTCCTACCGTTGGAAAAAACAAGCCTGCAGGGTTTCACTGGAGTTGATCCTCAAACACACTTTTCTCAGTGCAACAATAACTTTCAAAGAAGATTTAGGTAA 3138 0.3588 MENPEVEKSEETNRQIDNTKSNSKQQSVDKANEHPDWLPDGWNVEVRTRKSGVHMGSGYKCYIEPLKRYKFFSKPEVLRYLETVKDNSCTSKKGKKCSNMHSPKHNSCSSKKEKKCSNMHSPNDNNSTSKKEKKSTNMDSPNDNSCTLKKEKNCSNVDSPNDNSFTPKKEKNCSNMDCPNDNSCTPKKEKNCSNMDSPNDNSCTPKKEKNCSNMDSPTDVVVEKSTVEDLPPGWVKELKIRKNSKGIRKDPFYIDPASGYVFRSKKDVLRYLESGDIRSCAFRPSRRQIQDEDNLTPPPVAKRQKLKQSASEQQLSSATEILDKSSLELLDANSSRKWKNANVSSGTMVASVPMGESVVKMHSLEDGAANSSEVKKTSDPGSSALLNESLKESEEVLSADDVQEKEHVLNVMENANEKNHGNHSISKNRKEFNVPHRSSPRLAGSKPVQLANNLINERTLQVPKRNLRKSRNTLDVDISEDQTVSKDQPHQQEADKIEDNNKPEIQISPNKSSKKKEYHLPRRASKRLAAIEHETMNSKAKLQQSECGPVTVLADQAPINGKSANKRKKSAPQLEKRENEEMDDEKSESQLSFAFHYSWSDPSLEYAINTLTGSRDSENNLLDTVTGGSDRKSQVRSNKPQRKKEVKVPMRLSKRLAGLEPEVAPAERAIEYSTRKSCKEEPTATATLTNGVSDHHDAGEETKLTPQASDSLKTEVLGESLNQSGKSCDAQTGDKEQLQKVEAENIGDARSEPQLPLLFGDSWSDPCLEFAIKTLTGALPVDAGDIMPALPPGFDNPPYKQLHGSLATSINQEAHDNSNQSQNKKELNMVSQPVLRTSSTSYENAPKFTTRVSYLDQGNIIRNLNEEPRHTGNTTPPVHHSRNINSLTHEEPLKQNGQFVEGGFVTMGQQLFETGTVNHDNSESQYSAPFMNSWSDPCLEFAFKTLTGVIPVEENLTLQGCFQEPVNYHERRDGGSMLPDLGSSSFSQSDFSFLHDTGVKSMPGKQSSMSSSFLPLEKTSLQGFTGVDPQTHFSQCNNNFQRRFR 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02010 1045 SUPERFAMILY DNA-binding domain 22 90 IPR016177 GO:0003677
Gma05g02010 1045 MobiDBLite consensus disorder prediction 462 522 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 614 634 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 558 588 - -
Gma05g02010 1045 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 105 IPR001739 GO:0003677
Gma05g02010 1045 MobiDBLite consensus disorder prediction 413 446 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 420 436 - -
Gma05g02010 1045 Pfam Methyl-CpG binding domain 230 276 IPR001739 GO:0003677
Gma05g02010 1045 Pfam Methyl-CpG binding domain 34 100 IPR001739 GO:0003677
Gma05g02010 1045 MobiDBLite consensus disorder prediction 1 41 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 568 588 - -
Gma05g02010 1045 PANTHER OS04G0193200 PROTEIN 617 1035 IPR038945 -
Gma05g02010 1045 PANTHER OS04G0193200 PROTEIN 2 614 IPR038945 -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 154 173 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 1 17 - -
Gma05g02010 1045 PANTHER OS04G0193200 PROTEIN 617 1035 - -
Gma05g02010 1045 Gene3D - 192 320 - -
Gma05g02010 1045 Gene3D - 4 191 - -
Gma05g02010 1045 PANTHER OS04G0193200 PROTEIN 2 614 - -
Gma05g02010 1045 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 220 287 IPR001739 GO:0003677
Gma05g02010 1045 MobiDBLite consensus disorder prediction 186 217 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 89 148 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 614 646 - -
Gma05g02010 1045 CDD MBD 230 274 - -
Gma05g02010 1045 SUPERFAMILY DNA-binding domain 229 279 IPR016177 GO:0003677
Gma05g02010 1045 MobiDBLite consensus disorder prediction 675 712 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 283 318 - -
Gma05g02010 1045 MobiDBLite consensus disorder prediction 462 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02010 Gma-Chr5 41437625 41443779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02010 - - gmx:100807457 1815.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02010 05 41437625 41443779 Gma05g02010 05 41437625 41443779 ECH
Gma05g02010 05 41437625 41443779 Gma08g00113 08 979947 985667 GST
Gma01g02183 01 57103621 57105730 Gma05g02010 05 41437625 41443779 PCT