Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00110 ATGACGTGTAGCAGTGGCATTGGCCCCATTCGAATCGGCTTAAAGTTCTGCTCTCCCACGTTCAGCCAACGTTCCTTCTCTCTTTCTCTTCTCACCGGCTGGTCACCGGCTTCTTTCATTCTCCGACCGCCCCTACCCCCTTCATTCCCGATTGCTTCGTTCGGGAACATGTCCAGTCACGCTGCTTCTTCTTTAAGGACCGCTTCCTTCTGCAATAGCCCCACGCGCCCCAAGAACAAATCCTATGCCTCTGACCATTCAACGCCTCACTTCATTGCTCGTAAAACCTTTTCCTCACCGCGCATCATGGAAGAGAGAACTGTGAAATCATTGCGGCTTTCAAAGGCATTGACAGTTCCTGAAACAACAACCGTCTATGAAGCTTGCCGTAGAATGGCTGCTCGCAAAGTAGATGCTCTGTTACTCACTGATTCCAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCTCGTGAGGTTAATCTCGAAGAAACACATGTTTCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGACGCTCTTGCTGTTGAAGCCCTCCAAAAGATGGTGCAAGGTTGGTTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTTGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGAAAGCTGAGAAAGGAAAGGCAATTGCGGCAGCAGTTGAAGGTATCGAAAAACACTGGGGAACATCTACTCCTGGCTCCAATTCGACATTCATGGAGACTCTTCGGGAGCAGATATTTAAGCCATCTTTGTCTACAATTATTCCTCAGAATTCAAAGGTTGTAACAGTTTCACCAACAGACTCAGTTTTGACGACAACAAAGAAGATGCTTGAACTTCGTGCAAGTTCAGCTGTTGTGACGGTTGGTGACAAACTTTGTGGTATTCTTACTTCAAAGGATATCTTGATGCGGGTAATAGCACAGAGTCTTCCTCCATCGTCAACTCTTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGGAACAATTGATACACCAATAATCGATGCACTTCACACTATGCATGACGGAAATTTTTTGCATCTTCTTGTGGTTAATAGAGATGGCATTGTTGTTGCTACGGTTGATGCGATTCATATCACGCATGCTGCTGTGGCGACAGCTAGTCAGGTCGGAAATACTCCCAATTTTAACAGCGAAGCTGCCAACTCCATGATACAAAAAATTTGGGATTCGGCCATGGCCTTAGCTCCAAATGAGGAGGAAGAGGATTCACAAAGCGAGACTTCCTTGAAAATGATTTCTGAGGGAGGAGAAACAGGAAGATCCATTTCTTATCTTGCGTCAAGCATGCAGAACGCATTTTCCTTCAAATTACAAGACAGGAAGGGCAGATTGCATAGGTTCACATGCGATACTCGGAGCTTGGCAGAGGTTATAACGTCCGTCATTCAGAGAGTCGGTGATGATATTGACCCCATGGACCTGCCCCAAATTTTGTATGAAGATGAAGAAAATGATAAAGTTGTACTGGCTTCGGACAGTGATCTTGCTGCAGCTGTGGACCACGCAAAGACGGCTGGTTTGAAGGGACTGAGATTGCATTTAGACTACTCTGGAACACATGGTTATGGAACTGATTCAAGTTCATTAAGTTGGAAATATGCTAATTCAGAAGCATGGGCATCGGCATACAGTGCCATTGCTGCTGGAGCTGCAGTTGTTGCTGCCTTAGGTCTATTGGCGTTTGTGAGGCGAAGTCAATGA 1806 0.4546 MTCSSGIGPIRIGLKFCSPTFSQRSFSLSLLTGWSPASFILRPPLPPSFPIASFGNMSSHAASSLRTASFCNSPTRPKNKSYASDHSTPHFIARKTFSSPRIMEERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETHVSKVMTRNPVFVLSDALAVEALQKMVQGWFRHLPVVENGEVVAILDIAKCLYDAIARMERKAEKGKAIAAAVEGIEKHWGTSTPGSNSTFMETLREQIFKPSLSTIIPQNSKVVTVSPTDSVLTTTKKMLELRASSAVVTVGDKLCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIIDALHTMHDGNFLHLLVVNRDGIVVATVDAIHITHAAVATASQVGNTPNFNSEAANSMIQKIWDSAMALAPNEEEEDSQSETSLKMISEGGETGRSISYLASSMQNAFSFKLQDRKGRLHRFTCDTRSLAEVITSVIQRVGDDIDPMDLPQILYEDEENDKVVLASDSDLAAAVDHAKTAGLKGLRLHLDYSGTHGYGTDSSSLSWKYANSEAWASAYSAIAAGAAVVAALGLLAFVRRSQ 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00110 601 Gene3D - 84 243 IPR046342 -
Gma08g00110 601 SMART cbs_1 350 398 IPR000644 -
Gma08g00110 601 SMART cbs_1 181 225 IPR000644 -
Gma08g00110 601 SMART cbs_1 115 163 IPR000644 -
Gma08g00110 601 SMART cbs_1 285 332 IPR000644 -
Gma08g00110 601 Pfam PB1 domain 468 550 IPR000270 GO:0005515
Gma08g00110 601 SUPERFAMILY CAD & PB1 domains 460 557 - -
Gma08g00110 601 SUPERFAMILY CBS-domain pair 105 222 IPR046342 -
Gma08g00110 601 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 86 589 - -
Gma08g00110 601 CDD CBS_pair_MUG70_2 283 399 - -
Gma08g00110 601 Pfam CBS domain 174 218 IPR000644 -
Gma08g00110 601 Pfam CBS domain 114 160 IPR000644 -
Gma08g00110 601 Pfam CBS domain 283 329 IPR000644 -
Gma08g00110 601 CDD CBS_pair_MUG70_1 113 229 - -
Gma08g00110 601 ProSiteProfiles CBS domain profile. 112 171 IPR000644 -
Gma08g00110 601 SMART PB1_new 467 552 IPR000270 GO:0005515
Gma08g00110 601 SUPERFAMILY CBS-domain pair 284 396 IPR046342 -
Gma08g00110 601 ProSiteProfiles CBS domain profile. 279 339 IPR000644 -
Gma08g00110 601 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 86 589 IPR034896 -
Gma08g00110 601 ProSiteProfiles CBS domain profile. 178 236 IPR000644 -
Gma08g00110 601 ProSiteProfiles CBS domain profile. 347 404 IPR000644 -
Gma08g00110 601 Gene3D - 272 412 IPR046342 -
Gma08g00110 601 CDD PB1_MUG70 468 552 - -
Gma08g00110 601 ProSiteProfiles PB1 domain profile. 465 552 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00110 Gma-Chr8 958741 964074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00110 - - gmx:100805867 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00110 08 958741 964074 Gma08g00110 08 958741 964074 ECH
Gma05g02003 05 41395529 41400948 Gma08g00110 08 958741 964074 GST
Gma04g01908 04 49344508 49351522 Gma08g00110 08 958741 964074 PCT
Gma06g01503 06 14474127 14475957 Gma08g00110 08 958741 964074 PCT