Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma05g02003 | ATGTTCCTTCTCGATCTCTCTTTCTCTTCTCACCGGCTGGTCACCGGCTTCTCTCATTCTCCGACCGTCCCCACCCCCTTCATTCCCGATTCGTTCGTCTTCGCTGCTTCGCGTCAACACTTTTCTTCTCTTCTAGTGTTCGGGAAGATGTCGAGTCACGGTGGTTCTTCTTTAAGGAACGGTTCCTTGTCCAATAGCCCCACGCGGGCCAAGAAGAAAGCCTTTGGCTCTGAGCATTCAACGCCTGACTTTATTGCTCGTAAAACCTTTACCTCACCGCGCACCATGGGAGAGAGAACTGTGAAATCATTGCGGCTTTCAAAGGCATTGACAGTTCCTGAAACAACAACCGTCTATGAAGCTTGCCGTAGGATGGCTGCTCGCAAAGTTGATGCTCTATTACTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCTCGTGAAGTTAATCTCGAAGAAACACCTGTTTCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTTCTGATACTCGTGCTGTGGAAGCCCTCCAAAAGATGGTGCAAGGTTGGTTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTAGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCGGCAGCAGTTGAAGGTATCGAAAAACACTGGGGAACATCTACTCCTGCCTCCAATTCGACATTCATGGAGACTCTTCGCGAGCAGATATTTAAGCCATCTTTGTCTACAATTATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACCAACAGACTCGGTTTTGACTACAACAAAGAAGATGCTTGAACTTCGTGCAAGTTCAGCTGTTGTGACGATTGATGACAAACCTTGTGGTATTCTTACTTCAAAGGATATCTTGATGCGGGTAATAGCACAGAGTCTTCCTCCATCGTCAACTCTTGTTGAGAAGGTCATGACTCCAAATCCAGAATGTGGAACAATTGATACACCAATAGTCGATGCACTTCACACTATGCATGACGGAAAATTTTTGCATCTTCCTGTGGTTAATAGAGGTGGCATTGTTGTTGCTACGGTTGATGTGATTCATATCACGCATGCGGCTGTGGCGACAGCTAGTCAGGTCGGAAATACGCCCAATTTTAACAACGAAGCTGCCAACTCCATGATACAAAAATTTTGGGATTCGGCCATGGCCTTAGCTCCAAATGAGGAGGATGAGGATTCACAAAGCGAGGCTTCCTTGAAAATGATTTCCGAGGGAGGAGAAACAGGGAGATCCATTTCTTATCTTACGTCAAGCATGCAGAACGTATTTTCGTTCAAATTACAAGACAGGAAGGGCAGATTGCATAGGTTCACATGCGATACTCGGAGCTTGGCAGAGGTTATAACTTCCATCGTTCAGAGAGTCGGTGATGATATTGACCCCATGAACCTGCCCCAAATTTTGTATGAAGATGAAGACAATGATAAAGTTGTACTGGCTTCGGACAGTGATCTTGCTGCAGCTGTGGACCACGCGAAGACGGCTGGTTTGAAGGGATTGAGATTGCATTTAGACTACTCTGGAACACATGGTTATGGAACTGATTCAAGTTCAGTAAGTTGGAAATATGCTAATTCAGAAGCATGGGCATCGGCATACAGTGCCATTGCTGCTGGAGCTGCAGTTGTTGCTGCCTTAGGTCTATTGGCGTTTGTGAGGCGAAGTCGATGA | 1785 | 0.4549 | MFLLDLSFSSHRLVTGFSHSPTVPTPFIPDSFVFAASRQHFSSLLVFGKMSSHGGSSLRNGSLSNSPTRAKKKAFGSEHSTPDFIARKTFTSPRTMGERTVKSLRLSKALTVPETTTVYEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPVSKVMTRNPVFVLSDTRAVEALQKMVQGWFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKHWGTSTPASNSTFMETLREQIFKPSLSTIIPENSKVVTVSPTDSVLTTTKKMLELRASSAVVTIDDKPCGILTSKDILMRVIAQSLPPSSTLVEKVMTPNPECGTIDTPIVDALHTMHDGKFLHLPVVNRGGIVVATVDVIHITHAAVATASQVGNTPNFNNEAANSMIQKFWDSAMALAPNEEDEDSQSEASLKMISEGGETGRSISYLTSSMQNVFSFKLQDRKGRLHRFTCDTRSLAEVITSIVQRVGDDIDPMNLPQILYEDEDNDKVVLASDSDLAAAVDHAKTAGLKGLRLHLDYSGTHGYGTDSSSVSWKYANSEAWASAYSAIAAGAAVVAALGLLAFVRRSR | 594 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma05g02003 | 594 | Pfam | PB1 domain | 462 | 543 | IPR000270 | GO:0005515 | |
| Gma05g02003 | 594 | Gene3D | - | 83 | 236 | IPR046342 | - | |
| Gma05g02003 | 594 | SUPERFAMILY | CAD & PB1 domains | 453 | 550 | - | - | |
| Gma05g02003 | 594 | SMART | PB1_new | 460 | 545 | IPR000270 | GO:0005515 | |
| Gma05g02003 | 594 | Gene3D | - | 471 | 542 | - | - | |
| Gma05g02003 | 594 | MobiDBLite | consensus disorder prediction | 55 | 71 | - | - | |
| Gma05g02003 | 594 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED | 79 | 582 | IPR034896 | - | |
| Gma05g02003 | 594 | SMART | cbs_1 | 278 | 325 | IPR000644 | - | |
| Gma05g02003 | 594 | SMART | cbs_1 | 174 | 218 | IPR000644 | - | |
| Gma05g02003 | 594 | SMART | cbs_1 | 343 | 391 | IPR000644 | - | |
| Gma05g02003 | 594 | SMART | cbs_1 | 108 | 156 | IPR000644 | - | |
| Gma05g02003 | 594 | CDD | CBS_pair_MUG70_2 | 276 | 392 | - | - | |
| Gma05g02003 | 594 | Pfam | CBS domain | 167 | 211 | IPR000644 | - | |
| Gma05g02003 | 594 | Pfam | CBS domain | 107 | 153 | IPR000644 | - | |
| Gma05g02003 | 594 | Pfam | CBS domain | 336 | 386 | IPR000644 | - | |
| Gma05g02003 | 594 | Pfam | CBS domain | 276 | 322 | IPR000644 | - | |
| Gma05g02003 | 594 | Gene3D | - | 265 | 405 | IPR046342 | - | |
| Gma05g02003 | 594 | ProSiteProfiles | CBS domain profile. | 340 | 397 | IPR000644 | - | |
| Gma05g02003 | 594 | ProSiteProfiles | CBS domain profile. | 272 | 332 | IPR000644 | - | |
| Gma05g02003 | 594 | ProSiteProfiles | PB1 domain profile. | 458 | 545 | IPR000270 | GO:0005515 | |
| Gma05g02003 | 594 | CDD | PB1_MUG70 | 461 | 545 | - | - | |
| Gma05g02003 | 594 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 79 | 582 | - | - | |
| Gma05g02003 | 594 | MobiDBLite | consensus disorder prediction | 55 | 74 | - | - | |
| Gma05g02003 | 594 | ProSiteProfiles | CBS domain profile. | 105 | 164 | IPR000644 | - | |
| Gma05g02003 | 594 | ProSiteProfiles | CBS domain profile. | 171 | 229 | IPR000644 | - | |
| Gma05g02003 | 594 | SUPERFAMILY | CBS-domain pair | 98 | 214 | IPR046342 | - | |
| Gma05g02003 | 594 | CDD | CBS_pair_MUG70_1 | 106 | 222 | - | - | |
| Gma05g02003 | 594 | SUPERFAMILY | CBS-domain pair | 277 | 389 | IPR046342 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma05g02003 | Gma-Chr5 | 41395529 | 41400948 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma05g02003 | - | - | gmx:100783514 | 1072.38 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma05g02003 | 05 | 41395529 | 41400948 | Gma05g02003 | 05 | 41395529 | 41400948 | ECH | |
| Gma05g02003 | 05 | 41395529 | 41400948 | Gma08g00110 | 08 | 958741 | 964074 | GST | |
| Gma04g01908 | 04 | 49344508 | 49351522 | Gma05g02003 | 05 | 41395529 | 41400948 | PCT | |
| Gma06g01503 | 06 | 14474127 | 14475957 | Gma05g02003 | 05 | 41395529 | 41400948 | PCT |