Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00070 ATGAGTAAGCATCCCTATAAAACGGCGTTCAAAACGGAACACGATCAAAACGCCGTCGTCAATACTACTAGCAGGGAAGAACACGAGGAAGCATTGGTGGCTCTCGTCGAACACCGTACCCGTGAAGTCAAAAACGGAAGGAAAGAACTTGAGGAATTGTTTCCTTTAATATGCAAGAGTTCTTCACCGGGCTCAGTGTTTTGCCAAAAATTAAGCAGTCAGTTGCCAAGTCTGCATAAAAAAAGAGTGCGGCGAATTGCTGTGTGCCCTGTGAATGATCATCGTTTTGTGACCAGTGCTTTGGACGGAGTGGTCAACTTGTGGGAAGTTCATAGTTCTGGATCAGGAGCTTCTCTGCTTAGAACTACTGATTGTGCATCCCAAAAGCAGAGGAGATGGCCAGAAGATGTAGCCTGGCACCCAGATGTGAACAGTGTATTTTCAGTATATAATGCTGATAGCCAAGACTCTCAGATATCAGTAACAGATTTTAGTAAGGTAAAAGGGGGAGAGAGAGAACGTGTTAATTTCTTAGAGGACAAGCCTCATGTTAAGGGTGTTATAAATAGCATTGTTTTTCTGCCCTGGGAAAATACCAGTTTTGTAACTGGTGGAACTGACCATGCTGTCATAATGTGGAATGAGAATAGTGAGAACAAATGGAAGCCCCAACTATTGCATAATTATGATCATTCTTCTGCCGTCATGGGAGTGGCTGGTATGCAGCAGAAGCAAATTGTGTTGTCCGCCGGTAAAGACAAGAAGATTTTGGGGTATGATGTTCATGCAGGAAAACAAGAGTTCAAGCATCAAGTTGATAGTAAATGTTTGAGTGTGCTTCCAAATCCGTGTGACTTCAATTTATTCATGGTCCAAACGGGGTAA 885 0.4305 MSKHPYKTAFKTEHDQNAVVNTTSREEHEEALVALVEHRTREVKNGRKELEELFPLICKSSSPGSVFCQKLSSQLPSLHKKRVRRIAVCPVNDHRFVTSALDGVVNLWEVHSSGSGASLLRTTDCASQKQRRWPEDVAWHPDVNSVFSVYNADSQDSQISVTDFSKVKGGERERVNFLEDKPHVKGVINSIVFLPWENTSFVTGGTDHAVIMWNENSENKWKPQLLHNYDHSSAVMGVAGMQQKQIVLSAGKDKKILGYDVHAGKQEFKHQVDSKCLSVLPNPCDFNLFMVQTG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00070 294 Gene3D - 3 283 IPR015943 GO:0005515
Gma08g00070 294 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 47 294 - -
Gma08g00070 294 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 47 294 - -
Gma08g00070 294 SMART WD40_4 68 109 IPR001680 GO:0005515
Gma08g00070 294 SMART WD40_4 171 214 IPR001680 GO:0005515
Gma08g00070 294 SMART WD40_4 222 260 IPR001680 GO:0005515
Gma08g00070 294 SUPERFAMILY WD40 repeat-like 76 290 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00070 Gma-Chr8 590263 592478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00070 - - ccaj:109813667 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00070 08 590263 592478 Gma08g00070 08 590263 592478 ECH
Gma08g00070 08 590263 592478 Gma04g01946 04 49917358 49923595 PCT
Gma08g00070 08 590263 592478 Gma06g01458 06 13904800 13912800 PCT
Gma04g01946 04 49917358 49923595 Gma08g00070 08 590263 592478 PCT
Gma06g01458 06 13904800 13912800 Gma08g00070 08 590263 592478 PCT