Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00068 ATGGAAACAGTGAGGACTAGAGAAGGAGCAATAGCCAAAGACACCACTGAAACTGAACTCACCAAAATCCCTCTCCTCCGGGCAACTGTTGAAACACTTCATCCCTCTTCCAAGGAAGAGGATGATTTTATGATTAGAAGATTCCTGCGTGCTCGTGATTTAGATGTAGAGAAGGCTTCGGCAATGTTCCTCAAGTACTTGAAATGGAGACATGAATTTGTTCCAAATGGTTCTGTATCAGTGTCTGATGTTCCTATCGAACTTGCACAGGATAAGGTGTTCATGCAAGGACGCGACAAGATAGGTCGACCTATACTTATTGTCTTTGGTAGAAGGCATTTTCAGAACAAAGATGGTCTAGATGAATTCAAACGTATTAATTTAACAATACATACCATTTGGTGTATTAGTATGCCACCTGGGCAAGAAAAGTTTGTTGGTATAGCAGAACTGAAGGGATGGGGATACTCAAACAGTGACGTGCGTGGATACCTTAGTGCTCTATCCATTTTGCAGGATTACTACCCTGAGAGATTGGGAAAGTTGTTTATTGTGAATGCACCATACATTTTTATGAAAGTGTGGAAAATTATTTACCCATTCATTGACAACAAAACCAAGAAGAAGATAGTATTTGTGGAAAAAAATAAGGTGAAATCAACACTGCTAGAAGAGATGGACGAAAGTCAGGTCCCAGAGATATTCGGTGGCTCACTGTCATTGGTCCCAATTCAGGATGCTAATTAA 747 0.4029 METVRTREGAIAKDTTETELTKIPLLRATVETLHPSSKEEDDFMIRRFLRARDLDVEKASAMFLKYLKWRHEFVPNGSVSVSDVPIELAQDKVFMQGRDKIGRPILIVFGRRHFQNKDGLDEFKRINLTIHTIWCISMPPGQEKFVGIAELKGWGYSNSDVRGYLSALSILQDYYPERLGKLFIVNAPYIFMKVWKIIYPFIDNKTKKKIVFVEKNKVKSTLLEEMDESQVPEIFGGSLSLVPIQDAN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00068 248 Gene3D - 6 246 IPR036865 -
Gma08g00068 248 SUPERFAMILY CRAL/TRIO domain 85 240 IPR036865 -
Gma08g00068 248 SMART sec14_4 87 240 IPR001251 -
Gma08g00068 248 Pfam CRAL/TRIO, N-terminal domain 38 64 IPR011074 -
Gma08g00068 248 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 243 IPR001251 -
Gma08g00068 248 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 9 247 - -
Gma08g00068 248 SMART CRAL_TRIO_N_2 41 66 IPR011074 -
Gma08g00068 248 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Gma08g00068 248 Pfam CRAL/TRIO domain 92 237 IPR001251 -
Gma08g00068 248 PANTHER OS03G0850700 PROTEIN 9 247 - -
Gma08g00068 248 CDD SEC14 93 237 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00068 Gma-Chr8 561378 566964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00068 26 233 Acyl Lipid Metabolism Gene Families AT5G47730 28.700 4.40e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00068 - - gmx:100796822 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01454 06 13846394 13849406 Gma08g00068 08 561378 566964 ECH
Gma08g00068 08 561378 566964 Gma08g00068 08 561378 566964 ECH
Gma05g01966 05 40980869 40987765 Gma08g00068 08 561378 566964 GST
Gma08g00068 08 561378 566964 Gma04g01954 04 49997711 50000713 PCT
Gma08g00068 08 561378 566964 Gma06g01454 06 13846394 13849406 PCT
Gma04g01954 04 49997711 50000713 Gma08g00068 08 561378 566964 PCT
Gma06g01454 06 13846394 13849406 Gma08g00068 08 561378 566964 PCT