Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01954 ATGGAGGGTGTGAGCCCCGAGCCCCTGAGATCAGAATTGGATTCCAAATCCAAACATGACACAGCAAAAGAAGATGATGACGCTTTGAAAGACAGCACTGAAGCCGAAGTCACCAAAATTCGTCTCATGAGAGCCTTTGTTGAAAGCCGAGATCCCTCTTCCAAGGAAGAAAATGATTTGATGATGAGAAGATTCTTGCGGGCTCGTAGTTTGGATGTGGAGAAGGCTTCGGCAATGTTCCTTAAGTACTTGAAATGGAAGCGTTCATTTGTTCCAAATGGTTGCATATCACCGTCAGAGATTGCCGAAGATATTGCACAGGACAAGGTGTTTACGCAAGGACTCGACAAGAAGGGTCGACCTATAGTTGTTACCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGTTTCAAACGGTATGTGGTGTTTGTTCTTGAGAAGCTTTGTTCAAGGATGCCACCGGGGCAAGAAAAGTTTCTTGCCATTGCAGACATTAAAGGATGGGCATACGTAAACAGTGACCTTCGTGGATACCTTAATTCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGGAAGATGCTTATTGTACACGCACCTTATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGAAAATACCAAGAAAAAGATCGTATTCGTGGAGAACAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGAGGAGAGTCAAATCCCGGATATATACGGAGGCCAAATGCCATTAGTTCCTATCCAGAATAGCTGA 795 0.4226 MEGVSPEPLRSELDSKSKHDTAKEDDDALKDSTEAEVTKIRLMRAFVESRDPSSKEENDLMMRRFLRARSLDVEKASAMFLKYLKWKRSFVPNGCISPSEIAEDIAQDKVFTQGLDKKGRPIVVTFAAKHFQSKNGADGFKRYVVFVLEKLCSRMPPGQEKFLAIADIKGWAYVNSDLRGYLNSLSILQDCYPERLGKMLIVHAPYMFMKIWKMIYPFIDENTKKKIVFVENKKLKSTLLEEIEESQIPDIYGGQMPLVPIQNS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01954 264 PANTHER OS03G0850700 PROTEIN 11 264 - -
Gma04g01954 264 SUPERFAMILY CRAL/TRIO N-terminal domain 28 94 IPR036273 -
Gma04g01954 264 Pfam CRAL/TRIO domain 109 254 IPR001251 -
Gma04g01954 264 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 11 264 - -
Gma04g01954 264 Gene3D - 6 262 IPR036865 -
Gma04g01954 264 SMART sec14_4 104 257 IPR001251 -
Gma04g01954 264 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 98 260 IPR001251 -
Gma04g01954 264 SUPERFAMILY CRAL/TRIO domain 100 257 IPR036865 -
Gma04g01954 264 MobiDBLite consensus disorder prediction 7 34 - -
Gma04g01954 264 CDD SEC14 110 255 IPR001251 -
Gma04g01954 264 MobiDBLite consensus disorder prediction 1 34 - -
Gma04g01954 264 SMART CRAL_TRIO_N_2 58 83 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01954 Gma-Chr4 49997711 50000713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01954 62 227 Acyl Lipid Metabolism Gene Families AT5G47730 26.923 9.45e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01954 - - gmx:100799549 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01954 04 49997711 50000713 Gma06g01454 06 13846394 13849406 GST
Gma05g01966 05 40980869 40987765 Gma04g01954 04 49997711 50000713 PCT
Gma08g00068 08 561378 566964 Gma04g01954 04 49997711 50000713 PCT
Gma04g01954 04 49997711 50000713 Gma05g01966 05 40980869 40987765 PCT
Gma04g01954 04 49997711 50000713 Gma08g00068 08 561378 566964 PCT