Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00497 ATGAACCAAGAAATGAATGGGGTTGAGGCTGAGAAGAGGCAAGAGAATGGACATGAGAAAGTGGATTATGATGTGCAGGAGAAAATAGACTATGTGTTTAAGGTGGTGGTGATAGGGGACTCAGCAGTTGGCAAGACTCAAATACTCTCAAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCAAAGTCCACCATTGGGGTTGAATTCCAGACTAGGACTGTCACTATTAATGGCAAAGTCATCAAAGCTCAGATCTGGGACACTGCTGGCCAAGAAAGGTATAGGGCTGTAACAAGTGCATACTACAGAGGTGCATTAGGGGCAATGCTGGTCTACGACATAACGAAGAGGCAATCGTTTGATCATGTTGCAAGATGGGTTGAGGAGCTGCGTGCACACGCAGATAGCTCCATTGTGATCATGTTGGTGGGGAACAAAGCTGACCTTGTGGACCAGAGAATGGTGCCAACTGAGGATGCAGTGGAGTTTGCTGAGGACCAAGGCCTCTTCTTCTCTGAGACTTCAGCACTCAGTGGTGACAATGTGGAGAGTGCATTTCTCAAATTGCTAGAAGAGATCAATAGGGTAGTGTCCAAAAAGGCTTTGGAATGTGGTTATGGGAAGGAGAATGGTGACAACAATGTTGTTGCCTCACTCAATGGAACAAAGGTTGATATAATCTTGGGTCCTGAATTGGAAATTAGTGAGATGAAGAAATTGTCTTCGTGCTCTTGTTAA 738 0.4485 MNQEMNGVEAEKRQENGHEKVDYDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSCSC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00497 245 PANTHER - 1 245 - -
Gma07g00497 245 CDD Rab11_like 30 193 - -
Gma07g00497 245 Pfam Ras family 34 194 IPR001806 GO:0003924|GO:0005525
Gma07g00497 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 197 IPR027417 -
Gma07g00497 245 SMART rho_sub_3 35 199 IPR001806 GO:0003924|GO:0005525
Gma07g00497 245 ProSiteProfiles small GTPase Ras family profile. 27 228 IPR001806 GO:0003924|GO:0005525
Gma07g00497 245 ProSiteProfiles small GTPase Rho family profile. 26 197 - -
Gma07g00497 245 TIGRFAM small_GTP: small GTP-binding protein domain 32 186 IPR005225 GO:0005525
Gma07g00497 245 SMART ras_sub_4 30 196 - -
Gma07g00497 245 SMART arf_sub_2 18 197 - -
Gma07g00497 245 SMART ran_sub_2 38 240 - -
Gma07g00497 245 PANTHER RAS-RELATED PROTEIN RABA3 1 245 - -
Gma07g00497 245 Gene3D - 25 224 IPR027417 -
Gma07g00497 245 ProSiteProfiles small GTPase Rab1 family profile. 28 235 - -
Gma07g00497 245 PRINTS Transforming protein P21 ras signature 33 54 - -
Gma07g00497 245 PRINTS Transforming protein P21 ras signature 56 72 - -
Gma07g00497 245 PRINTS Transforming protein P21 ras signature 74 96 - -
Gma07g00497 245 PRINTS Transforming protein P21 ras signature 136 149 - -
Gma07g00497 245 PRINTS Transforming protein P21 ras signature 171 193 - -
Gma07g00497 245 SMART rab_sub_5 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00497 Gma-Chr7 4694050 4695554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00497 K07904 - gmx:100799439 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00497 07 4694050 4695554 Gma07g00497 07 4694050 4695554 ECH
Gma07g00497 07 4694050 4695554 Gma16g00194 16 2070191 2071751 GST
Gma19g02431 19 52780926 52782750 Gma07g00497 07 4694050 4695554 PCT
Gma03g02385 03 48959450 48961532 Gma07g00497 07 4694050 4695554 PCT
Gma07g00497 07 4694050 4695554 Gma19g02431 19 52780926 52782750 PCT
Gma07g00497 07 4694050 4695554 Gma03g02385 03 48959450 48961532 PCT