Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02385 ATGAATCAGGAAATGAATGGGGTTGAGGCTGAGAGGGTGAAAGTGAATGTGCATGACAAAATAGATTATGTGTTTAAGGTGGTGGTGATAGGGGACTCAGCTGTGGGTAAGACTCAGATACTGTCAAGGTTTGCAAAGAATGAATTCTGCTTTGACTCAAAATCTACCATTGGAGTTGAGTTCCAGACAAGAACTGTCACAATTAATGGCAAAGTCATCAAAGCCCAGATCTGGGATACTGCTGGCCAAGAAAGGTACAGGGCAGTGACAAGTGCATACTACAGAGGGGCATTAGGGGCCATGCTGGTGTACGACATTAGTAAAAGACAGTCGTTTGATCATGTGGCTAGGTGGGTTGACGAACTGAGAGCACACGCCGACAGTTCCATTGTGATCATGCTCATTGGGAACAAAGGTGACCTTGTGGACCAAAGAGTGGTACATGCTGAAGATGCAGTGGAGTTTGCAGAGGATCAGGGCCTCTTCTTCTCTGAGACTTCAGCTCTCAGTGGTGAGAATGTGGAGAGTGCCTTTTTCAAGTTGCTGGAAGAGATCCATAGGGTTATCTCAAAGAGGTCCTTGGAATGTGGTAATGGGAAGGCCAATGCTGACAACAATCTTGCCACTCTTAAAGGGTCAAAAATAGATGTTATCTCAGGTGCTGAATTAGAAATTACTGATATGAAGAAGTTGTCTTCATGTTCTTGTTAA 711 0.4444 MNQEMNGVEAERVKVNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGNGKANADNNLATLKGSKIDVISGAELEITDMKKLSSCSC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02385 236 ProSiteProfiles small GTPase Ras family profile. 19 219 IPR001806 GO:0003924|GO:0005525
Gma03g02385 236 ProSiteProfiles small GTPase Rho family profile. 18 189 - -
Gma03g02385 236 PANTHER - 1 236 - -
Gma03g02385 236 SMART rho_sub_3 27 191 IPR001806 GO:0003924|GO:0005525
Gma03g02385 236 TIGRFAM small_GTP: small GTP-binding protein domain 24 178 IPR005225 GO:0005525
Gma03g02385 236 PRINTS Transforming protein P21 ras signature 25 46 - -
Gma03g02385 236 PRINTS Transforming protein P21 ras signature 48 64 - -
Gma03g02385 236 PRINTS Transforming protein P21 ras signature 66 88 - -
Gma03g02385 236 PRINTS Transforming protein P21 ras signature 128 141 - -
Gma03g02385 236 PRINTS Transforming protein P21 ras signature 163 185 - -
Gma03g02385 236 PANTHER RAS-RELATED PROTEIN RABA3 1 236 - -
Gma03g02385 236 Gene3D - 17 216 IPR027417 -
Gma03g02385 236 SMART ras_sub_4 22 188 - -
Gma03g02385 236 CDD Rab11_like 22 186 - -
Gma03g02385 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 190 IPR027417 -
Gma03g02385 236 ProSiteProfiles small GTPase Rab1 family profile. 20 234 - -
Gma03g02385 236 SMART arf_sub_2 6 189 - -
Gma03g02385 236 SMART ran_sub_2 30 231 - -
Gma03g02385 236 SMART rab_sub_5 25 188 - -
Gma03g02385 236 Pfam Ras family 26 186 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02385 Gma-Chr3 48959450 48961532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02385 K07904 - gmx:100787725 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02385 03 48959450 48961532 Gma03g02385 03 48959450 48961532 ECH
Gma19g02431 19 52780926 52782750 Gma03g02385 03 48959450 48961532 GST
Gma03g02385 03 48959450 48961532 Gma07g00497 07 4694050 4695554 PCT
Gma03g02385 03 48959450 48961532 Gma16g00194 16 2070191 2071751 PCT
Gma07g00497 07 4694050 4695554 Gma03g02385 03 48959450 48961532 PCT
Gma16g00194 16 2070191 2071751 Gma03g02385 03 48959450 48961532 PCT