Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00311 ATGCCCAACACAGTGCCTACTACAGCAACCAGTTCCTCCTCTACTAGTCTGTTTGAGCTTCTCACCGAAATGAAGAAGCAATCCTGTCCAGAATCACTCATCTTACAAGCAAAATCTCCCTCCCAATTCTCCTCCGAATGCTGGTTCGACGATGCATGCATCTTGGACATGGATTACTTCGTCAAGACCCTTTCTGGCATCAAGGCTAAAGGCGTTCGTGCAGACCTTATTGGCTTCATCATCACACACTACGCCTCCAAATGGCTCCCTGACCTCTCCGCAGGTGACATGGCCGAAAAGGGTCTCACCCAATTCGAGGAATCGCCCGAAAGCGTAACAGCTTCATGGATGAAGAAGAGATTCTTCGTGGAAACCTTGGTGGGTGTTCTGCCTCCTGAGAAGGATGCAATTCCATGCAACTTCCTCCTTCGGCTTCTGAGAACGGCCAACATGGTTGGGGTTGAGGGTACCTACAGGCAAGAGCTTGAGAAGCGTATTTCGTGGCAGTTGGACCAGGCTTCCTTGAAGGAGTTGGTGATTCCATCTTTCAGCCACACTTGTGGGACTCTATTGGATGTTGAGCTGGTCATTAGGCTGGTTAAGAGGTTTGTGAGTTTGGATAGTGAGGGAGCTAAGAGCGTTGCTTCTTTGGTTAAGGTGGCTAAGTTGGTTGATTCCTACCTGGCTGAGGCTGCTGTGGATGCCAATTTGAGCTTCAACGACTTCGTTACACTTGCTGCAGCTCTTCCAAGCCATGCAAGAGCAACGGATGATGGCTTGTACAGAGCCATTGATACTTATCTAAaaGCACATCCAGGAGTGTCAAAGCAAGAAAGGAAGGGCCTGTGCAGGCTAATAGACAGCAGAAAACTAACAGCAGAGGCCTCACTTCACGCAGCACAAAACGAACGGTTCCCAGTGAGAGCAGTGATTCAGGTGCTACTCTCTGAGCAGAGCAAGCTGAACCGGCATGTGGATTGGAGTGGCTCGTTGGTGAGTGTAACAAGAAGCCCTGGAGGGTTGGACTTACCAACACGGTGTCTGTCGAAGCGCGAGGTGAATGCTCAACAACTCGAGATTAGAAGGCTGAAGGAAGATGTGTACAGGCTGCAAAGCCATTGCAATGCCATGCAGGCACAGATGGAGAGAATGGTGGTGGAAAAGAAGAAAGGCTTCTTCAAGTGGAAGAAGTTTGCATTTGGCAAGAGTGAGCATGACAAAATGGAACAAGAGCTTCAAGGAAATGGAATGTACACGCCTGCGGACCTTAAAACTAGATTGGTCAATGCTAAAGGTACTAGTAAGAATAATACTCACAAGTGGAGGAAATCCATGTCATGA 1341 0.4862 MPNTVPTTATSSSSTSLFELLTEMKKQSCPESLILQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGFIITHYASKWLPDLSAGDMAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLLRLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRFVSLDSEGAKSVASLVKVAKLVDSYLAEAAVDANLSFNDFVTLAAALPSHARATDDGLYRAIDTYLKAHPGVSKQERKGLCRLIDSRKLTAEASLHAAQNERFPVRAVIQVLLSEQSKLNRHVDWSGSLVSVTRSPGGLDLPTRCLSKREVNAQQLEIRRLKEDVYRLQSHCNAMQAQMERMVVEKKKGFFKWKKFAFGKSEHDKMEQELQGNGMYTPADLKTRLVNAKGTSKNNTHKWRKSMS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00311 446 ProSiteProfiles NPH3 domain profile. 46 320 IPR027356 -
Gma07g00311 446 PANTHER OS12G0117600 PROTEIN 2 446 IPR043454 -
Gma07g00311 446 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 446 - -
Gma07g00311 446 Pfam NPH3 family 47 296 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00311 Gma-Chr7 2651355 2653694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00311 45 321 EF-hand Containing Proteins AT3G44820 37.171 1.12e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00311 - - gmx:100793820 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00311 07 2651355 2653694 Gma07g00311 07 2651355 2653694 ECH
Gma07g00311 07 2651355 2653694 Gma08g01915 08 17217794 17224500 GST
Gma13g03240 13 46458388 46461104 Gma07g00311 07 2651355 2653694 PCT
Gma07g00311 07 2651355 2653694 Gma13g03240 13 46458388 46461104 PCT