Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00064 ATGACAGGTGGGATGTTTGGAAGGAAGGGGCAAAAGATAAAGGGGACAGTGGTGTTGATGCCAAAGAATGTGTTGGACTTCAACGCCATAACCTCCGTCGGAAAAGGCAGTGCTAAGGACACCGCCACCGATTTCTTGGGCAAAGGCTTGGACGCATTAGGTCATGCAGTTGATGCTCTCACTGCCTTCGCTGGCCATAGCATCTCCTTGCAGCTTATCAGTGCTACTCAGACTGATGGTAGTGGAAAAGGAAAAGTTGGAAACGAAGCCTATTTGGAAAAACATCTTCCGACCTTGCCAACGTTGGGAGCAAGGCAGGAAGCATTCGATATTAACTTTGAATGGGATGCTAGTTTTGGAATTCCAGGAGCATTTTACATCAAAAACTTTATGACTGATGAGTTTTTCCTCGTCAGTGTTAAACTCGAGGACATTCCAAACCATGGAACCATTAACTTCGTTTGTAACTCATGGGTTTATAACTTCAAAAGTTACAAAAAGAATCGCATTTTCTTTGTCAATGATACATATCTTCCGAGTGCTACACCAGGTCCACTAGTTAAGTACAGACAAGAAGAATTGGAGGTTTTAAGAGGAGATGGAACAGGGAAGCGCAGAGACTTTGACAGAATCTATGATTATGATATCTATAATGATTTGGGCAATCCAGATGGTGGTGATCCTCGCCCAATCATTGGAGGCTCTAGCAACTATCCTTACCCTCGCAGGGTTAGAACCGGTAGAGAAAAGACCAGGAAAGATCCCAACAGTGAGAAACCAGGCGAGATATATGTTCCAAGAGATGAAAACTTCGGTCACTTGAAGTCATCTGATTTCCTTACATATGGAATCAAATCCTTATCTCAGAACGTGATACCTTTGTTCAAATCTATAATATTTGACTTAAGGGTCACATCGAGTGAGTTCGATAGCTTCGACGAAGTGCGTGGTCTCTTTGAAGGTGGAATCAAGCTGCCAACAAATATACTGAGCCAAATTAGCCCCTTACCAGTCCTCAAGGAAATCTTCCGCACTGATGGTGAAAATACCCTTCAATTTCCACCACCTCATGTAATCAGAGCAGTTAGTAAATCTGGATGGATGACTGATGATGAGTTTGCAAGAGAGATGATTGCTGGTGTAAATCCAAATGTAATTCGTCGTCTTCAAGAGTTCCCACCAAAAAGCACTCTTGATCCCGCAACCTATGGTGATCAAACTAGTACCATAACAAAACAACAGTTGGAGATTAACTTGGGTGGGGTCACAGTAGAAGAGgcaattagtgctcacagattattcatattagattaccatgatgcattcttcccgtatttgacgaagataaacagcctacctattgcaaaagcttatgccacaaggacaatcctgttcttgaaagacgatggatctttaaagccacttgctatcgaattaagcaagcctgcaacagtgagtaaagtggtgttgcctgcaacagaaggtgttgagagtacaatttggttgttggccaaggctcatgtcattgtgaatgactctggttatcatcagctcataagccattggttaaatactcatgcagtgatggagccatttgccatagcaacaaacaggcatctcagtgtgcttcaccccatttataaacttctttatcctcactacaaggacacaataaatatcaatggccttgctaggcagtccctgattaacgcaggtggcattattgagcaaacatttttgcctggaaagtactccattgaaatgtcatcagttgtttacaagaattgggttttcactgaccaagcattaccagctgatcttgtcaagagAGGATTGGCAGTTGAGGATCCCTCTGCCCCACATGGTCTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAAATATGGGATGCTATTAAGACATGGGTCCATGAGTATGTCTCTGTGTATTACCCAACAAATGCAGCAATTCAACAAGACACTGAACTTCAAGCATGGTGGAAGGAAGTTGTGGAGAAGGGTCATGGTGACTTAAAAGATAAGCCTTGGTGGCCTAAACTGCAGACTGTGGAGGATCTCATTCAATCCTGCTCTATTATCATATGGACAGCTTCGGCTCTCCATGCAGCTGTTAATTTTGGGCAATACCCTTATGGAGGTTATATCGTGAACCGTCCAACTCTAGCCAGAAGGTTTATCCCAGAAGAAGGAACCAAAGAATATGATGAGATGGGGCAAAAGATAAAGGGGACAGTGGTGTTGATGCCAAAGAATGTGTTGGACTTCAACGCCATAACCTCCATCGGTAAAGGTGGTGTTATTGACACAGCCACCGGCATCTTAGGCCAAGGCGTCAGCTTAGTTGGTGGAGTAATTGATACTGCCACTTCCTTCTTAGGCCGTAATATCTCCATGCAATTGATCAGTGCTACTCAGACTGATGGCAGTGGAAATGGGAAAGTTGGAAAAGAAGTCTATTTGGAAAAACATCTTCCGACCTTGCCAACGTTGGGAGCAAGGCAGGATGCGTTCAGTATTTTCTTTGAATGGGATGCTAGTTTTGGAATTCCAGGAGCATTTTACATCAAAAACTTTATGACTGATGAGTTTTTCCTCGTCAGTGTTAAACTCGAGGACATTCCAAACCATGGAACCATTGAATTTGTTTGCAACTCATGGGTTTACAACTTCAGGAGTTACAAAAAGAATCGCATTTTCTTTGTCAATGATACATATCTTCCAAGTGCCACACCAGCTCCACTACTTAAGTACAGAAAAGAAGAATTGGAGGTTTTAAGAGGAGATGGAACAGGGAAGAGAAAGGACTTTGACAGAATCTATGATTATGATGTCTATAATGATTTGGGCAATCCAGATGGTGGTGATCCTCGCCCAATCCTTGGTGGGTCTAGCATCTATCCCTACCCTCGCAGGGTTAGAACAGGAAGAGAAAGGACCAGGACAGATCCCAACAGTGAGAAACCGGGCGAGGTTTATGTTCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATCGGATTTCCTTACATACGGAATCAAATCCTTATCTCACGATGTGATACCTTTGTTCAAATCTGCAATTTTTCAATTAAGGGTCACATCGAGTGAGTTTGAAAGCTTCGAAGATGTGCGTAGTCTCTATGAGGGTGGAATTAAATTGCCAACAGATATACTGAGCCAAATTAGCCCCTTACCAGCCCTCAAGGAAATCTTCCGCACTGATGGTGAAAATGTTCTTCAATTTCCACCACCTCATGTAGCCAAAGCAGTTAGTAAGTCTGGGTGGATGACTGATGAGGAATTTGCTAGAGAGGTGATTGCCGGTGTAAACCCAAATGTGATCCGTCGTCTTCAAGAATTCCCACCAAAGAGCACACTTGATCCCACACTCTATGGTGATCAAACCAGTACCATAACAAAAGAACAATTGGAGATTAACATGGGAGGGGTCACAGTAGAAGAGgcacttagtactcagagattattcatattagattaccaagatgcattcatcccatatttgacgaggataaacagcctacctactgcaaaagcttatgccacaaggacaatcctgttcttgaaagatgatggtactttgaagccacttgctattgaattaagcaaaccacatccagatggagataatttgggtcctgagagtatagtggtgttgcctgcaactgaaggtgttgatagtacaatttggctattggccaaggctcatgttattgtgaatgactctggttatcatcagctcgtgagccattggttaaatactcatgcagtgatggaaccatttgccatagcaaccaataggcatctcagtgtgctccaccctatttataaacttctttatcctcactaccgcgacaccataaatatcaatggacttgctaggcagtccctgattaatgcagatggcattatagagaaatcatttttgcccggaaagtactccattgagatgtcttcatccgtctacaagaattgggttttcactgaccaagcattaccagctgatctcgtcaagagAGGATTGGCAATTGAAGATCCCTCTGCACCCCATGGCCTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAAATATGGGATGCTATTAAGACATGGGTTCATGAATATGTCTCCTTGTATTACCCAACAGATGCAGCAGTTCAACAAGATACTGAACTACAAGCATGGTGGAAGGAAGCTGTGGAGAAGGGTCATGGTGACTTAAAAGAAAAGCCTTGGTGGCCTAAAATGCAGACAACTGAAGATCTCATTCAATCATGCTCTATTATCGTTTGGACAGCTTCGGCTCTCCATGCTGCTGTTAATTTTGGACAATATCCTTATGGGGGCTTAATCCTGAACCGTCCAACTCTAGCCAGAAGGTTTATCCCAGCTGAAGGAACCCCAGAGTATGATGAGATGCCTATTTTGACCTTCATGGTTCCCGGAACTCAATTGACCTAA 4524 0.3267 MTGGMFGRKGQKIKGTVVLMPKNVLDFNAITSVGKGSAKDTATDFLGKGLDALGHAVDALTAFAGHSISLQLISATQTDGSGKGKVGNEAYLEKHLPTLPTLGARQEAFDINFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTINFVCNSWVYNFKSYKKNRIFFVNDTYLPSATPGPLVKYRQEELEVLRGDGTGKRRDFDRIYDYDIYNDLGNPDGGDPRPIIGGSSNYPYPRRVRTGREKTRKDPNSEKPGEIYVPRDENFGHLKSSDFLTYGIKSLSQNVIPLFKSIIFDLRVTSSEFDSFDEVRGLFEGGIKLPTNILSQISPLPVLKEIFRTDGENTLQFPPPHVIRAVSKSGWMTDDEFAREMIAGVNPNVIRRLQEFPPKSTLDPATYGDQTSTITKQQLEINLGGVTVEEAISAHRLFILDYHDAFFPYLTKINSLPIAKAYATRTILFLKDDGSLKPLAIELSKPATVSKVVLPATEGVESTIWLLAKAHVIVNDSGYHQLISHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYKDTININGLARQSLINAGGIIEQTFLPGKYSIEMSSVVYKNWVFTDQALPADLVKRGLAVEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSVYYPTNAAIQQDTELQAWWKEVVEKGHGDLKDKPWWPKLQTVEDLIQSCSIIIWTASALHAAVNFGQYPYGGYIVNRPTLARRFIPEEGTKEYDEMGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEELEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDPRPILGGSSIYPYPRRVRTGRERTRTDPNSEKPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENVLQFPPPHVAKAVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMPILTFMVPGTQLT 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00064 1507 CDD PLAT_LH2 751 913 IPR042057 -
Gma07g00064 1507 Gene3D - 178 274 - -
Gma07g00064 1507 Gene3D - 917 1013 - -
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 1197 1221 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 1045 1066 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 908 929 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 978 997 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 1090 1106 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 1130 1149 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 947 963 IPR001246 GO:0016491
Gma07g00064 1507 PRINTS Plant lipoxygenase signature 882 900 IPR001246 GO:0016491
Gma07g00064 1507 ProSitePatterns Lipoxygenases iron-binding region signature 2. 1289 1299 IPR020834 GO:0016702|GO:0046872
Gma07g00064 1507 ProSitePatterns Lipoxygenases iron-binding region signature 1. 1262 1276 IPR020833 GO:0016702|GO:0046872
Gma07g00064 1507 PRINTS Lipoxygenase signature 1262 1279 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 PRINTS Lipoxygenase signature 1244 1261 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 PRINTS Lipoxygenase signature 1282 1302 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 PANTHER LIPOXYGENASE 749 1494 IPR000907 GO:0016702|GO:0046872
Gma07g00064 1507 PANTHER LIPOXYGENASE 4 748 IPR000907 GO:0016702|GO:0046872
Gma07g00064 1507 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
Gma07g00064 1507 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 915 1507 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 Gene3D PLAT/LH2 domain 4 177 - -
Gma07g00064 1507 SUPERFAMILY Lipoxigenase 178 750 IPR036226 -
Gma07g00064 1507 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 177 IPR036392 GO:0005515
Gma07g00064 1507 Gene3D - 365 493 - -
Gma07g00064 1507 Gene3D - 1104 1239 - -
Gma07g00064 1507 ProSiteProfiles PLAT domain profile. 785 912 IPR001024 GO:0005515
Gma07g00064 1507 Gene3D - 1240 1505 - -
Gma07g00064 1507 Gene3D - 494 771 - -
Gma07g00064 1507 ProSiteProfiles PLAT domain profile. 48 173 IPR001024 GO:0005515
Gma07g00064 1507 Gene3D - 1014 1100 IPR027433 -
Gma07g00064 1507 Gene3D - 275 362 IPR027433 -
Gma07g00064 1507 CDD PLAT_LH2 12 174 IPR042057 -
Gma07g00064 1507 Pfam Lipoxygenase 925 1494 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 Pfam Lipoxygenase 186 754 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 MobiDBLite consensus disorder prediction 985 1005 - -
Gma07g00064 1507 MobiDBLite consensus disorder prediction 243 262 - -
Gma07g00064 1507 MobiDBLite consensus disorder prediction 222 262 - -
Gma07g00064 1507 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 749 916 IPR036392 GO:0005515
Gma07g00064 1507 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 748 IPR013819 GO:0016702|GO:0046872
Gma07g00064 1507 SMART LH2_4 11 174 IPR001024 GO:0005515
Gma07g00064 1507 SMART LH2_4 750 913 IPR001024 GO:0005515
Gma07g00064 1507 SUPERFAMILY Lipoxigenase 917 1495 IPR036226 -
Gma07g00064 1507 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 749 1494 - -
Gma07g00064 1507 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 4 748 - -
Gma07g00064 1507 Pfam PLAT/LH2 domain 817 911 IPR001024 GO:0005515
Gma07g00064 1507 Pfam PLAT/LH2 domain 77 172 IPR001024 GO:0005515
Gma07g00064 1507 ProSitePatterns Lipoxygenases iron-binding region signature 1. 516 530 IPR020833 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00064 Gma-Chr7 510463 521629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00064 1 748 Acyl Lipid Metabolism Gene Families AT1G55020 55.078 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00064 K15718 - gmx:547835 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03115 13 45348570 45354165 Gma07g00064 07 510463 521629 PCT
Gma15g00250 15 2182080 2186414 Gma07g00064 07 510463 521629 PCT