Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01868 ATGTCGAATCTGTTGTTTCTACCCTCACCTCCCCTCACCCCCTCCTCCATTCACCCCTCCCACACTTCATCTTCCGCTTCTGCCCTTCAATTCCAATGCCGATTCTCCCTTCTCTCTCGTCCCCGCCGCCACTCTCCCACTCTCACTCCCTTCCATAGAAGAAGAGACCTTTCCCTTCTCGTTTTCGGTTCCGATTCTCCCTCCGACGCAAAAACCGAAGAACAAGTAAAGGAAAATGAAGACGGCGTTGATGATCCGAGTGGTAGTGTGATCGAGGACGAGGATTATCCGAGCGGTGAATTCGACTTCGAACCGATTACCGGATGGAGAAGCTTCCTCGTCAAGCTCAAGATGCTCGTCGCGTTCCCTTGGGAGCGTGTTCGCAAGGGCAGTGTCCTCACTATGAAGCTTCATGGCCAGGTATCTGATCAAGTGAAGAGTAGGTTCTCTCCAGGACTTTCTCTGCCTCAAATTTGTGAGAATTTTTTGAAAGCAGCATATGATCCTCGTATTTCTGGGATCTATCTTCATATTGATAGTTTAAATTGCGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCATATACTGGATTTCAAAAAATCAGGAAAATTTGTTTTGGCTTATGTCCCTTTATGTCAAGAAAAAGAGTATTACCTTGCATCTGCATGTGAAGAGATATACGCCCCACCCAGTGCCTACTTTTCTTTATTTGGATTGACTGTTCAAGCCTCATTCCTCAGAGGTATTTTAGAAAACATAGGAATTGAACCACAAGTGGAAAGGATTGGAAAATACAAAAGTGCAGGAGATCAGCTAGCTCGAAGAACCATGTCTGAAGAAAATTGTGAGATGCTGACCACATTACTTGATAATATCTATACAAATTGGTTGGATAAAGTCTCTTCTGCCAAAGGAAAAACAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTTTATCAAATTACTGCCATGTTGAAGGAGAGACTTGGAGTGAAATCAGATAAAGATCTGCCTATGGTGGATTACAGGAAATACTCTAGAGTTAGGAAATGGACTGTTGGAATACCAGGTGGTAAAGAACTTATAGCCATTATCCGAGCATCAGGGAGTATTAGTCGTGTAGAGAGTCAATTATCTGTCTCTAGCTCAGGGATCATTGCAGAGAAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAGAATTCAAGGCTGCTATCATCAGAATTGACAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCGGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCTGATGTTATTGTTGCAGAAAGTCTTACATTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTGGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAATTTTATCAAGGGGAAAATATGCTGAGCTCCTTGCTGCTGAACAACGTCCTTTCAGACCAGATGAAGCAGAGCTATTTGCCAAATCTGCTCAGCATGCTTATAAACAATTTCGAGACAAGGCAGCTTCATCCAGATCAATGACTGTAGAAAAGATGGAGGAGTTTGCCCAGGGAAGGGTTTGGACTGGTAATGATGCAGCTTCACGTGGTTTAGTTGATGCTATTGGTGGTCTTTCTCGAGCTATTGCCATAGCAAAAATGAAGGCCGATATACCTCAAGACAGACAGGTTACACTTGTGGAGATGTCTAGAGCCAACCCTTCTCTACCCGAGATTTTGTTAGGCGTAGGGAGTTCCCTTGTTGTAGCAGACAGAACGGTGAAGGAACTGCTACAGGGCTTGACATTTTCTTATGGAGTTCAAGCCCGGATGGATGGAATCTTGTTTCAGACATTGGAAGAATATCCTTTTGGCAACCCTATTTTGTCAATAATAAAAGATATCATCAGTTCCCTGTAG 1992 0.4342 MSNLLFLPSPPLTPSSIHPSHTSSSASALQFQCRFSLLSRPRRHSPTLTPFHRRRDLSLLVFGSDSPSDAKTEEQVKENEDGVDDPSGSVIEDEDYPSGEFDFEPITGWRSFLVKLKMLVAFPWERVRKGSVLTMKLHGQVSDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILDFKKSGKFVLAYVPLCQEKEYYLASACEEIYAPPSAYFSLFGLTVQASFLRGILENIGIEPQVERIGKYKSAGDQLARRTMSEENCEMLTTLLDNIYTNWLDKVSSAKGKTREDIENFINEGVYQITAMLKERLGVKSDKDLPMVDYRKYSRVRKWTVGIPGGKELIAIIRASGSISRVESQLSVSSSGIIAEKFIEKIRTVRESKEFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGADVIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEILSRGKYAELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAASSRSMTVEKMEEFAQGRVWTGNDAASRGLVDAIGGLSRAIAIAKMKADIPQDRQVTLVEMSRANPSLPEILLGVGSSLVVADRTVKELLQGLTFSYGVQARMDGILFQTLEEYPFGNPILSIIKDIISSL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01868 663 Pfam Peptidase family S49 198 323 IPR002142 GO:0006508|GO:0008233
Gma06g01868 663 Pfam Peptidase family S49 431 581 IPR002142 GO:0006508|GO:0008233
Gma06g01868 663 CDD S49_Sppa_N_C 363 577 IPR002142 GO:0006508|GO:0008233
Gma06g01868 663 PANTHER PROTEASE 4 50 662 - -
Gma06g01868 663 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 363 577 IPR004635 GO:0006508|GO:0008233
Gma06g01868 663 CDD S49_SppA_67K_type 133 330 - -
Gma06g01868 663 SUPERFAMILY ClpP/crotonase 360 568 IPR029045 -
Gma06g01868 663 MobiDBLite consensus disorder prediction 66 90 - -
Gma06g01868 663 Gene3D - 359 507 - -
Gma06g01868 663 PIRSF Protease_4_SppA 57 662 IPR004634 GO:0006465|GO:0008233|GO:0016021
Gma06g01868 663 Gene3D - 508 626 - -
Gma06g01868 663 SUPERFAMILY ClpP/crotonase 119 320 IPR029045 -
Gma06g01868 663 Gene3D - 130 274 - -
Gma06g01868 663 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01868 Gma-Chr6 20273775 20289889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01868 K04773 - gmx:100781522 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01868 06 20273775 20289889 Gma06g01868 06 20273775 20289889 ECH
Gma17g00780 17 6567652 6575315 Gma06g01868 06 20273775 20289889 PCT
Gma05g00163 05 1553827 1557644 Gma06g01868 06 20273775 20289889 PCT