Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00163 AAAATACTCTGGAGTTAGGAAATCAACTCTTGGACTATCAGGTGGCAAAGAATTAATAGCCATCATCCGAGCTTCAGGGAGTATTCGTCGTATCCAGAGTCCTTTAAGTGCCCGTAGCTCTGGTATAATTGGAGAGAAGCTAATTGGGAAGATACGCAAAGTTAGAGGTACACACAATCTTATAAACTCACCTTCTTTAAATCGGCACATAATTAGTGGAATTTTTTGGGGCTATTTACTTTTAGTGTGGCAAGAAATCAGGCTTCTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCAGGAGTTATTGTTGCAGAAAGTCTTACCTCAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTTGGGAAACTTTCTGAGAAGATTGGCTTCAACAAAGAAATCATATCAAAGGGTAGATATGCTGAGCTCCATGCAGCTGAACAGCGTTCTTTAAGATGA 508 0.4154 KYSGVRKSTLGLSGGKELIAIIRASGSIRRIQSPLSARSSGIIGEKLIGKIRKVRGTHNLINSPSLNRHIISGIFWGYLLLVWQEIRLLAASKPVIASMSDVAASGGYYMAMGAGVIVAESLTSTGSIGVVTGKFNLGKLSEKIGFNKEIISKGRYAELHAAEQRSLR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00163 168 PANTHER PROTEASE 4 1 167 - -
Gma05g00163 168 Gene3D - 14 166 - -
Gma05g00163 168 Pfam Peptidase family S49 89 160 IPR002142 GO:0006508|GO:0008233
Gma05g00163 168 SUPERFAMILY ClpP/crotonase 78 137 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00163 Gma-Chr5 1553827 1557644 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00163 K04773 - gmx:100809623 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00163 05 1553827 1557644 Gma05g00163 05 1553827 1557644 ECH
Gma17g00780 17 6567652 6575315 Gma05g00163 05 1553827 1557644 GST
Gma05g00163 05 1553827 1557644 Gma06g01868 06 20273775 20289889 PCT