Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00606 ATGTCTAAAGTTTTCAGCTTTACCGGAAATGATGATTTCTACCATGGGGGCCCTATTTATCCTAACCCGAAGGAACCATGTCTCTTCTTGTCTCTTGGCCGTCAAGTTGATGTTTACCTTCCTCTTCAGAAGAGGTCTCGCTTCAGTGTTCCATTTGATATCAGCGGAGAATGGTTTGAGCAGAAGCAGAAGCCAAAGACATCTATTGAATCTTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGCTGCCTGCAGGCCAAGATAGGAGTGTCTGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTCTGAGCAGTATTTGCAAGACTGAAATCCACAGCTACGGAAGTACTGGAAATGAAAACCAGGAAATTAGTGACGAAGGATACCTATCCCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCCGTTGGGACAGCCTCTCGAGGAGGGTTGGGGAAGCTTACAATTCGTGGATGCAATTCAGATCGTGGGGTGACTAATGTAGGTCTCAAGGCAATTGCTCATGGGTGTCCTTCTCTAAAGGTTTGCTCTCTATGGGATGTCGCTACTGTTGGTGATGTAGGCCTGATTGAGATTGCTAGTGGGTGCCATCAGTTAGAGAAGCTTGACCTATGCAAGTGTCCTAATATTTCTGACAAGACTTTAATAGCAGTTGCGAAGAACTGTCCGAATCTGGCTGAGTTATCCATAGAGTCATGTCCCAACATTGGTAATGAAGGTCTACAAGCTATTGGGAAGTGTCCCAATCTGAGGTCAATCTCAATCAAGAATTGCTCCGGGGTTGGTGATCAGGGAGTTGCTGGCCTCTTGTCTTCAGCTTCTTTTGCTCTAACAAAGGTGAAGCTTGAGTCACTGACTGTTTCTGATCTCTCTCTAGCAGTGATTGGGCATTATGGTGTTGCAGTTACCGATCTTGTCCTAAGTTGCCTCCCAAATGTCAGCGAGAAAGGGTTCTGGGTTATGGGTAATGGCCACGGACTGCAGAAACTAACTTCAATCACAATCAATTGCTGCCAAGGAGTGACAGATGTTGGGCTTGAAGCTATTGGAAGGGGTTGTCCAAATGTGCAAAACTTGAAGCTTCGTAAGAGTGCTTTTCTGTCAGACAAGGGATTAGTATCATTTGCCAGGGCTGCTCCATCAGTTGAGAGCCTGCAATTGCAAGAGTGCCACAGAATTACCCAAATTGGGCTCTTTGGTGTCTTTTTTAACTGTGGTGCAAAATTGAAGGTTCTTACTCTGATTAGCTGCTATGGGATCAAAGATCTCAATATGGATTTGCCAGCAATATCTCCTTCTGAATCAATTTGGTCATTAACAATCCATGACTGCCCTGGATTTGGCAATGCTAACCTTGCCTTACTTGGAAAGCTGTGTCCTCGGCTTCAGCATGTTGAATTGAGTGGACTTCAGGGAGTAACAGATGCAGGGTTTCTTCCATTGCTGGAGAGCTCTGAGGCTGGTCTGGTTAAAGTTAATCTAAATGGCTGTGTAAATCTTTCAGACAGAGTAGTTTTGTCCATGGTCAACTCACATGGATGGACTCTCGAGGTGCTAAGCCTTGATGGTTGTAAAAGAGTTGGTGATGCTAGCTTGATGGCAATTGCAGGCAGTTGCCCATTGCTTGCTGATCTCGATGTTTCCAGGTGTGCAATCACTGATACAGGTATCGCAGCCCTTGCACGCGGAAAGCAGATTAACCTTGAGGTACTTTCTTTGGCAGGTTGTGCATTGGTTTCAGACAAGAGCGTGCCTGCCTTGAAAAAAATGGGCTGTTCCCTTGCTGGATTAAATATCAAGCGTTGCAAAGGAATCAGCAGCCGCTCTGTCAACAAGCTTCAGGAACATCTCTGCATGTGTGACATCCTCTACTGA 1917 0.457 MSKVFSFTGNDDFYHGGPIYPNPKEPCLFLSLGRQVDVYLPLQKRSRFSVPFDISGEWFEQKQKPKTSIESLPDECLFEILRRLPAGQDRSVCASVSKRWLMLLSSICKTEIHSYGSTGNENQEISDEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSDRGVTNVGLKAIAHGCPSLKVCSLWDVATVGDVGLIEIASGCHQLEKLDLCKCPNISDKTLIAVAKNCPNLAELSIESCPNIGNEGLQAIGKCPNLRSISIKNCSGVGDQGVAGLLSSASFALTKVKLESLTVSDLSLAVIGHYGVAVTDLVLSCLPNVSEKGFWVMGNGHGLQKLTSITINCCQGVTDVGLEAIGRGCPNVQNLKLRKSAFLSDKGLVSFARAAPSVESLQLQECHRITQIGLFGVFFNCGAKLKVLTLISCYGIKDLNMDLPAISPSESIWSLTIHDCPGFGNANLALLGKLCPRLQHVELSGLQGVTDAGFLPLLESSEAGLVKVNLNGCVNLSDRVVLSMVNSHGWTLEVLSLDGCKRVGDASLMAIAGSCPLLADLDVSRCAITDTGIAALARGKQINLEVLSLAGCALVSDKSVPALKKMGCSLAGLNIKRCKGISSRSVNKLQEHLCMCDILY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00606 638 SUPERFAMILY RNI-like 297 634 - -
Gma06g00606 638 SUPERFAMILY RNI-like 160 288 - -
Gma06g00606 638 PANTHER UNCHARACTERIZED 16 629 - -
Gma06g00606 638 SMART fbox_2 72 113 IPR001810 GO:0005515
Gma06g00606 638 SMART LRR_CC_2 500 525 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 605 630 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 553 577 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 184 209 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 262 286 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 527 552 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 473 498 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 236 261 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 579 604 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 393 418 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 341 366 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 210 235 IPR006553 -
Gma06g00606 638 SMART LRR_CC_2 367 392 IPR006553 -
Gma06g00606 638 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 629 - -
Gma06g00606 638 Gene3D Ribonuclease Inhibitor 61 284 IPR032675 -
Gma06g00606 638 Gene3D Ribonuclease Inhibitor 285 444 IPR032675 -
Gma06g00606 638 Gene3D Ribonuclease Inhibitor 445 637 IPR032675 -
Gma06g00606 638 SUPERFAMILY F-box domain 65 106 IPR036047 GO:0005515
Gma06g00606 638 Pfam F-box domain 70 108 IPR001810 GO:0005515
Gma06g00606 638 Pfam Leucine Rich repeat 553 575 IPR001611 GO:0005515
Gma06g00606 638 Pfam Leucine Rich repeat 235 258 IPR001611 GO:0005515
Gma06g00606 638 Pfam Leucine Rich repeat 342 363 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00606 Gma-Chr6 5492527 5496166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00606 K14515 - gmx:547505 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00606 06 5492527 5496166 Gma06g00606 06 5492527 5496166 ECH
Gma04g00621 04 5677824 5680286 Gma06g00606 06 5492527 5496166 GST
Gma17g02007 17 36000711 36004336 Gma06g00606 06 5492527 5496166 PCT
Gma14g01098 14 14771175 14774852 Gma06g00606 06 5492527 5496166 PCT
Gma06g00606 06 5492527 5496166 Gma17g02007 17 36000711 36004336 PCT
Gma06g00606 06 5492527 5496166 Gma14g01098 14 14771175 14774852 PCT