Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00371 ATGAAACTCATACCTGTCAGACAATCTGCAATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTTATTGTCCATACTTGGTACTACCTTTATTGCAACTACGGCCAATAATGCAACAGATTCCTACTGGCTTCACAGAATTAAATCAGAACTTGTAGATCCATTTGGTGCCCTTAGCAACTGGTCTTCAACAACTCAAGTCTGCAACTGGAATGGAATAACATGTGCAGTTGATCAGGAACATATTATAGGCCTGAATCTGTCTGGTTCAGGAATATCAGGTTCCATTTCAGCTGAGTTAAGTCACTTCACTTCTCTTCGAACACTTGATTTGTCTTCAAATTCACTTTCTGGCTCCATCCCTTCAGAGCTGGGTCAGCTTCAAAATCTAAGAATATTGCAACTACACTCAAATGATCTCTCCGGAAATATTCCTTCAGAGATTGGTAACTTGAGGAAGTTGCAAGTTCTTAGAATAGGAGACAACATGTTGACAGctttgagccatctttctaacttgacatacctgaattTGCTTGGAAACAAACTACATGGAGAGATTCCTTCTGAGCTTAATAGTCTGATTCAGTTGCAGAAGCTTGACTTGTCCAAAAACAACCTTTCTGGATCAATACCTCTCCTTAATGTAAAATTGCAAAGTCTTGAAACTCTTGTTTTGTCTGATAATGCTCTGACAGGTAGCATTCCAAGTAACTTCTGCCTCAGAGGTTCAAAGCTTCAGCAGCTTTTCTTGGCTAGAAACATGCTCTCTGGCAAGTTTCCCTTGGAGTTACTCAACTGCTCCTCAATCCAACAGTTGGACCTTTCTGATAACAGCTTTGAAGGAGAACTTCCTTCCAGCTTGGACAAACTGCAGAACCTCACAGATCTTGTGCTCAACAACAACAGTTTTGTTGGATCTTTACCTCCTGAAATTGGCAACATTAGTAGCTTGGAAAGTCTTTTCCTATTTGGTAACTTCTTCAAAGGTAAAATTCCGTTGGAGATTGGAAGGCTGCAGAGATTGAGCTCCATTTACCTCTATGACAACCAGATTTCTGGACCCATACCAAGGGAGTTAACAAACTGCACAAGCTTAAAGGAAGTCGACTTCTTTGGAAATCACTTCACAGGGCCAATTCCAGAAACTATAGGTAAGCTCAAGGGTTTGGTTGTTCTTCATCTTAGGCAGAATGACTTGTCTGGTCCAATCCCACCAAGCATGGGATACTGTAAAAGCCTTCAGATATTGGCCTTAGCAGATAACATGTTGTCTGGTTCCATTCCACCCACTTTCAGTTACCTCTCAGAACTCACTAAAATTACCCTTTACAATAACTCCTTTGAAGGACCTATCCCTCATTCACTCTCTTCCCTCAAAAGCCTCAAAATCATAAACTTTTCACACAACAAGTTCAGTGGAAGTTTCTTTCCTCTCACTGGTTCAAATTCCCTGACCCTTCTGGACCTGACTAACAACAGCTTCTCAGGTCCCATCCCTTCCACTCTAACCAATTCTAGAAACCTCAGCCGTCTCAGACTTGGAGAAAATTATCTCACAGGAAGCATTCCTTCTGAATTTGGCCACCTTACTGTTCTCAACTTTCTTGATTTATCATTCAACAATTTAACAGGAGAAGTGCCACCTCAACTCTCAAACTCCAAGAAAATGGAACACATGTTGATGAATAACAACGGGTTGAGTGGAAAAATACCTGATTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTAGATCTCTCATACAATAACTTCCGTGGTAAGATACCTTCTGAGCTTGGTAACTGCTCAAAACTACTCAAGCTTTCTCTCCATCACAATAATCTCTCTGGTGAAATCCCCCAAGAGATTGGAAACCTCACTTCCCTCAATGTCCTCAATTTGCAAAGAAACAGCTTCTCTGGCATAATTCCTCCGACAATTCAGCGATGCACAAAGCTGTATGAGCTCAGGCTCTCAGAAAACTTGTTAACAGGTGCTATACCAGTTGAGCTAGGAGGGCTAGCTGAGTTGCAAGTGATATTGGACTTGAGTAAAAAtctcttcactgGATTCCCACTAAGCTCATTCCTGAACAATAACGGCTTGTGTGGCCCACCTTTGAGTTCGTGCTCCGAATCCACGGCACAGGGGAAAATGCAGCTATCAAACACACAAGTGGCAGTAATCATTGTGGCCATTGTCTTTACTTCCACAGTGATATGCTTAGTGATGCTGTATATAATGCTCAGGATCTGGTGCAACTGGAGAAAAGTGGCAATTTCAAGTGCAGAGGGTGGTGGCACTGTTGCTCACAAGACCAGGAATGGAGAGTATTGGAATATGAATTCCTTTGGGTTCATTCCTTCACCAGATAAGCAGAATTCAGCAGCAACAACAACTTCATTCTACAATCTCAAAATGGAAACCATGGAAAATACAAGTATGTAA 2448 0.4097 MKLIPVRQSAMGSIWMCHFFLLLSILGTTFIATTANNATDSYWLHRIKSELVDPFGALSNWSSTTQVCNWNGITCAVDQEHIIGLNLSGSGISGSISAELSHFTSLRTLDLSSNSLSGSIPSELGQLQNLRILQLHSNDLSGNIPSEIGNLRKLQVLRIGDNMLTALSHLSNLTYLNLLGNKLHGEIPSELNSLIQLQKLDLSKNNLSGSIPLLNVKLQSLETLVLSDNALTGSIPSNFCLRGSKLQQLFLARNMLSGKFPLELLNCSSIQQLDLSDNSFEGELPSSLDKLQNLTDLVLNNNSFVGSLPPEIGNISSLESLFLFGNFFKGKIPLEIGRLQRLSSIYLYDNQISGPIPRELTNCTSLKEVDFFGNHFTGPIPETIGKLKGLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNMLSGSIPPTFSYLSELTKITLYNNSFEGPIPHSLSSLKSLKIINFSHNKFSGSFFPLTGSNSLTLLDLTNNSFSGPIPSTLTNSRNLSRLRLGENYLTGSIPSEFGHLTVLNFLDLSFNNLTGEVPPQLSNSKKMEHMLMNNNGLSGKIPDWLGSLQELGELDLSYNNFRGKIPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLQRNSFSGIIPPTIQRCTKLYELRLSENLLTGAIPVELGGLAELQVILDLSKNLFTGFPLSSFLNNNGLCGPPLSSCSESTAQGKMQLSNTQVAVIIVAIVFTSTVICLVMLYIMLRIWCNWRKVAISSAEGGGTVAHKTRNGEYWNMNSFGFIPSPDKQNSAATTTSFYNLKMETMENTSM 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00371 815 Pfam Leucine rich repeat 484 543 IPR001611 GO:0005515
Gma05g00371 815 PRINTS Leucine-rich repeat signature 194 207 - -
Gma05g00371 815 PRINTS Leucine-rich repeat signature 106 119 - -
Gma05g00371 815 Gene3D Ribonuclease Inhibitor 37 243 IPR032675 -
Gma05g00371 815 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Gma05g00371 815 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Gma05g00371 815 SUPERFAMILY L domain-like 243 551 - -
Gma05g00371 815 PANTHER LEUCINE RICH REPEAT KINASE 2 43 309 - -
Gma05g00371 815 PANTHER LEUCINE RICH REPEAT KINASE 2 291 502 - -
Gma05g00371 815 PANTHER LEUCINE RICH REPEAT KINASE 2 388 590 - -
Gma05g00371 815 PANTHER LEUCINE RICH REPEAT KINASE 2 218 408 - -
Gma05g00371 815 PANTHER LEUCINE RICH REPEAT KINASE 2 484 753 - -
Gma05g00371 815 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Gma05g00371 815 ProSiteProfiles Leucine-rich repeat profile. 153 174 IPR001611 GO:0005515
Gma05g00371 815 Pfam Leucine Rich Repeat 105 125 IPR001611 GO:0005515
Gma05g00371 815 Gene3D Ribonuclease Inhibitor 244 479 IPR032675 -
Gma05g00371 815 Gene3D Ribonuclease Inhibitor 480 714 IPR032675 -
Gma05g00371 815 SUPERFAMILY L domain-like 482 708 - -
Gma05g00371 815 SMART LRR_typ_2 578 602 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 530 554 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 194 217 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 674 698 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 218 242 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 291 315 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 151 173 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 103 127 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 339 363 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 387 411 IPR003591 -
Gma05g00371 815 SMART LRR_typ_2 626 650 IPR003591 -
Gma05g00371 815 SUPERFAMILY L domain-like 39 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00371 Gma-Chr5 3476030 3478948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00371 53 732 Receptor kinase-like Gene Family AT5G46330 35.264 5.94e-113 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00371 - - gmx:100818792 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00371 05 3476030 3478948 Gma05g00371 05 3476030 3478948 ECH
Gma17g00824 17 6949553 6952522 Gma05g00371 05 3476030 3478948 GST
Gma05g00371 05 3476030 3478948 Gma04g01796 04 47998793 48001764 PCT
Gma04g01796 04 47998793 48001764 Gma05g00371 05 3476030 3478948 PCT