Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02335 ATGGCAGGAGAAACATCTTGGATCAGCCACTATGATGACAGACAAAGGGAGACTGGGGCGTTTGATTCATTTTTAGAACTTAGTGAGGAAGGTGAAAAAGAAGCAACTGCTGTTTCTTTGGATGTTTTGCCGGATGACTTGTTGGAGCGAATTCTAGCCTATCTCCCCATTGCAAGCATTTTTAGAGCTGGCTGTGTGTCTAAGAGGTGGCATGAAATTGTTAACTCAGAGAGGTTTGTATGGAACCTTTCACATGTTCTACCGCAGAAACCTTGGTACTTTATGTTTACAAGCTCTGATGAACCAGGAGGTCATGCTTTTGATCCCCTCCTTCGGAAATGGTATAGCATTGAACTTCCATGCATTGGAACTTCTAATTGGTTCATTGCTTCATCATATGGCATGGTCTGCTTCATGGACAATGACAGCAGAAGTGAATTATGCATCTGCAACCCAATTACCAAAACCTACAGGAAGCTTGAGGAGCCTCCAGGTTTGAAATTTTCTGATTACAGTGCATTAGCAATCTCAGTGAACAGGGAATCTCACCGTTATACTGTGGCAATTGTAAAATCTAAACAAGTCCCCGACAACTATGTCCAGTGGGATATCTCAATTCATCTATACAATTCAGAAAATGCAATCTGGGTGACGTCTTTAACAGAAGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGAGATGCTGTACTTTTTAGTTTATTCAACTGGGGGTGGTCAATCAGAAAACCGTCATGCCCTAGTTGCGTATAACATGTCCAATCATTCATCTCAAGGTAGTTTAACAAGGAACTTCATTCCGGTACCTTGTTCTCTAACATGTGGCCGTTTGATGAATCTGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGTAAACCAGATCGACCTGACATAATAAAAGGAATTGGTATCTGGCTTCTAAATGATAAGAAGTGGGAAGAGATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTAGATGATGTGTTTGCTAGCAGCGGTGCAGATGATCTGATATATATTCAGAGTTATGGAGCTCCGGCGCTTCTCATATTTGACGTGAACCATAAACAATGGAAATGGTCGCAGAAGTGCCCTGTGTCAAAAAGATTCCCGCTGCAGCTTTTTACTGGCTTTTGCTTTGAGCCTAGACTTGAAATTGCTCCATAG 1212 0.4224 MAGETSWISHYDDRQRETGAFDSFLELSEEGEKEATAVSLDVLPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFVWNLSHVLPQKPWYFMFTSSDEPGGHAFDPLLRKWYSIELPCIGTSNWFIASSYGMVCFMDNDSRSELCICNPITKTYRKLEEPPGLKFSDYSALAISVNRESHRYTVAIVKSKQVPDNYVQWDISIHLYNSENAIWVTSLTEVLMGWRGGNESVICNEMLYFLVYSTGGGQSENRHALVAYNMSNHSSQGSLTRNFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKKWEEIARMPHKFFQGFGELDDVFASSGADDLIYIQSYGAPALLIFDVNHKQWKWSQKCPVSKRFPLQLFTGFCFEPRLEIAP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02335 403 ProSiteProfiles F-box domain profile. 37 84 IPR001810 GO:0005515
Gma03g02335 403 Gene3D - 33 83 - -
Gma03g02335 403 SUPERFAMILY F-box domain 39 142 IPR036047 GO:0005515
Gma03g02335 403 PANTHER BNAA09G39300D PROTEIN 1 403 - -
Gma03g02335 403 Pfam F-box domain 42 80 IPR001810 GO:0005515
Gma03g02335 403 SMART fbox_2 43 83 IPR001810 GO:0005515
Gma03g02335 403 PANTHER F-BOX FAMILY PROTEIN 1 403 IPR045048 -
Gma03g02335 403 SUPERFAMILY Galactose oxidase, central domain 105 382 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02335 Gma-Chr3 48573369 48577132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02335 - - gmx:100817678 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02379 19 52376334 52381765 Gma03g02335 03 48573369 48577132 ECH
Gma03g02335 03 48573369 48577132 Gma03g02335 03 48573369 48577132 ECH
Gma19g02375 19 52355256 52358248 Gma03g02335 03 48573369 48577132 GST
Gma03g02335 03 48573369 48577132 Gma07g00571 07 5516793 5517572 PCT
Gma07g00571 07 5516793 5517572 Gma03g02335 03 48573369 48577132 PCT