Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02379 ATGAAGGATTTCAATTCGGATCTATTTGACCCGGGAATGGTGATGGATTCTTCCTCCTCCGATTACTCTCGCAGTGCTTCCTCTTCCGACGCCGATTTCGGGTTCGCTTTCAATGACAGTAATTTCTCCGACAGGATCCTCCGAATCGAGATCATGGGGGACCCCGTCGAGGCCCGACCCGACTCCGAGGGTTGCACCACCATCGCCGACTGGGCTCGCCACCGCAAGAGGAGACGCGAGGATATCAAGAAGGATAACGTTGTTGATCTTACTTTATTGCCCGACGAGCAAATTTTGAATGAAAATCAGCCTGATATGGACGATTTTGTACCCTCTGAGAATCAAGATGAAGATGCGGTTGCAATGGTTGAAGAACCCCCTTCAGGTGATGAGGCGGCAAATAGCAATGATTCAAATTGGAATATGGATTGCTCTGCAGTTGTGAGAGTTAGAACACTACACATCAGTTCTCCTATTTTGGCTGCTAAAAGTCCTTTCTTCTACAAGCTTTTCTCAAATGGAATGAGGGAGTCAGAGCAGAGGCATGTCACCCTAAGAATTAATGCTTCTGAGGAAGCTGCTCTTATGGAGCTTCTGAATTTTATGTATAGTAATACCTTGAGCATTACTTCACCACCTGCTTTATTGGATGTGTTGATGGCTGCTGACAAATTCGAAGTTGCTTCCTGTATGAGATACTGTAGCCGATTATTGCGGAATATACCTATGACACCTGAGTCTGCATTGCTTTACCTTGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTTCAACCATTGACTGACGCAGCAAAGCAGTATCTTGCCAGTCGATACAAAGATATAACAAAGTTCCAGGAAGAGGTTATGGGCTTGCCTCTAGCTGGAATAGAAGCAATATTGTCTAGTGATGAACTCCAGGTTGCATCAGAGGATGCTGTATATGACTTTGTGTTGAAGTGGGTCCGAACACAGTATCCAAAACTAGAAGAGCGGAGAGAAGTCCTGGGTACACGACTTGCCCGTTTAATTCGCTTCCCTTACATGACCTGTCGAAAACTTAAGAAGGTCTTAACCTGCAATGACTTTGACCATGATGTTGCATCCAAGCTTGTACTCGAAGCCCTCTTTTTCAAGGCTGAGGCTCCACACCGCCAGCGGATACTAGCTGCTGAGTCTGCTTCCTTCAATCGACTTTTTGTGGAGCGGGCATACAAGTATCGCCCTGTTAAGGTGGTGGAATTTGAACTTCCGCGGCAGCAGTGTGTGGTTTACTTGGATCTGAAGCGGGAGGAGTGCACCAATTTGTTCCCATCTGGCCGAGTATATTCACAGGCATTCCATTTAGGTGGACAAGGGTTTTTCTTATCAGCACATTGCAACATGGACCAACAGAGCTCTTTCCATTGCTTTGGCCTGTTTTTAGGAATGCAGGAAAAGGGCTCAGTTAGCTTTGCCGTTGACTATGAGTTTGCTGCTAGGTCAAGGCCAACAGAGGAATTTGTTAGCAAGTACAAAGGCAATTATGTATTCACTGGGGGAAAGGCCGTCGGATATAGAAACTTGTTTGCAATTCCATGGACAACGTTCATGGCTGAAGATAGTCTTTACTTTATCAATGGTGTACTTCACCTTAGAGCTGAGCTCACCATCCGACACTGA 1662 0.4591 MKDFNSDLFDPGMVMDSSSSDYSRSASSSDADFGFAFNDSNFSDRILRIEIMGDPVEARPDSEGCTTIADWARHRKRRREDIKKDNVVDLTLLPDEQILNENQPDMDDFVPSENQDEDAVAMVEEPPSGDEAANSNDSNWNMDCSAVVRVRTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLSITSPPALLDVLMAADKFEVASCMRYCSRLLRNIPMTPESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMGLPLAGIEAILSSDELQVASEDAVYDFVLKWVRTQYPKLEERREVLGTRLARLIRFPYMTCRKLKKVLTCNDFDHDVASKLVLEALFFKAEAPHRQRILAAESASFNRLFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECTNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTTFMAEDSLYFINGVLHLRAELTIRH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02379 553 SMART BTB_4 117 242 IPR000210 GO:0005515
Gma19g02379 553 MobiDBLite consensus disorder prediction 1 30 - -
Gma19g02379 553 CDD BTB_POZ_ZBTB_KLHL-like 143 225 - -
Gma19g02379 553 Gene3D - 274 380 - -
Gma19g02379 553 Pfam BTB And C-terminal Kelch 265 357 IPR011705 -
Gma19g02379 553 SUPERFAMILY TRAF domain-like 439 551 - -
Gma19g02379 553 SUPERFAMILY POZ domain 138 239 IPR011333 -
Gma19g02379 553 Pfam BTB/POZ domain 141 239 IPR000210 GO:0005515
Gma19g02379 553 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 553 - -
Gma19g02379 553 SMART BACK_2 257 359 IPR011705 -
Gma19g02379 553 PANTHER OS02G0260700 PROTEIN 6 553 IPR045890 -
Gma19g02379 553 MobiDBLite consensus disorder prediction 12 30 - -
Gma19g02379 553 Gene3D Potassium Channel Kv1.1; Chain A 133 262 IPR011333 -
Gma19g02379 553 ProSiteProfiles BTB domain profile. 142 211 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02379 Gma-Chr19 52376334 52381765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02379 - - gmx:100781329 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02379 19 52376334 52381765 Gma03g02335 03 48573369 48577132 ECH
Gma19g02379 19 52376334 52381765 Gma19g02379 19 52376334 52381765 ECH
Gma19g02379 19 52376334 52381765 Gma03g02338 03 48595103 48600195 GST