Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02375 ATGGCGGGAGAAACATCTTGGATCAGCCACTATGATGACAGACAAAGGGAGACTGGGGCGTTTGATTCATTTTTAGAACTTGGTGAGGAAGGTGAAAAAGAAGCAACTGCTGTTTCTTTGGATGTTTTGCCAGATGACTTGTTGGAACGAATCCTAGCCTATCTCCCCATTGCAAGCATTTTTAGAGCTGGCTGTGTGTCTAAGAGGTGGCATGAAATTGTTAATTCAGAGAGGTTTGTATGGAACCTTTCACATGTTCTACCGCAGAAACCTTGGTACTTTATGTTTACGAGCTCTGATGAACCAGATGGTTATGCTTTTGATCCCGTCCTTCGGAAATGGTATCGGTATCGCATTGAACTTCCATGCATTGGAACTTCTAATTGGTTCATTGCTTCATCATATGGCATGGTCTGCTTCATGGACAATGACAGCAGAAGTGAAATATGCATCTGCAACCCAATTACCAAAACCTACAGGAAGCTTGAGGAGCCTCCAGGTTTGAAAGTTTCTGATTACAGTGCATTAGCAATCTCAGTGAACAGGGAATCTCACTGTTATACTGTGGCAATTGTAAAATCTAAACAAGTCCCTGAGAACTTTGTCCAGTGGGATATCTCAATTCATCTATACAATTCAGAAAATGCAACCTGGGTGACCTCTTTAACGGAAGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGGGATGCTGTACTTTTTAGTTTATTCAACCGGGGGTGGCCAACCTGTAAATCGTCATGCCCTAATTGCGTATAACATGTCCAATCATTCTTCTCAAGGTAGCTTAACAAGGAACTTCATTCCAGTACCTTTTTCTCTAACATGTGGCCGTTTGATGAATCTGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGTAAACCAGATCGACCTGACATAATAAAAGGAATTGGTATCTGGCTTCTAAAGGATAAGAAGTGGGAAGAGATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGGGAGTTTGATGATGTGTTTGCTAGCAGCGGTGCAGATGATCTGATATATATTCAGAGTTATGGAGGTCCGGCGCTTCTCATATTTGATGTGAACCATAAGCAATGGAAATGGTCGCAGAAATGCCCTGTGGGAAAAAGATTCCCGCTGCAGCTTTTTACTGGCTTTTGCTTTGAGGCTAGACTTGAAATTGCTCCATAG 1218 0.4261 MAGETSWISHYDDRQRETGAFDSFLELGEEGEKEATAVSLDVLPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFVWNLSHVLPQKPWYFMFTSSDEPDGYAFDPVLRKWYRYRIELPCIGTSNWFIASSYGMVCFMDNDSRSEICICNPITKTYRKLEEPPGLKVSDYSALAISVNRESHCYTVAIVKSKQVPENFVQWDISIHLYNSENATWVTSLTEVLMGWRGGNESVICNGMLYFLVYSTGGGQPVNRHALIAYNMSNHSSQGSLTRNFIPVPFSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLKDKKWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGGPALLIFDVNHKQWKWSQKCPVGKRFPLQLFTGFCFEARLEIAP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02375 405 Gene3D - 33 83 - -
Gma19g02375 405 ProSiteProfiles F-box domain profile. 37 84 IPR001810 GO:0005515
Gma19g02375 405 Gene3D - 92 397 IPR015915 GO:0005515
Gma19g02375 405 PANTHER F-BOX FAMILY PROTEIN 1 405 IPR045048 -
Gma19g02375 405 SUPERFAMILY Galactose oxidase, central domain 105 384 IPR011043 -
Gma19g02375 405 Pfam F-box domain 42 80 IPR001810 GO:0005515
Gma19g02375 405 SMART fbox_2 43 83 IPR001810 GO:0005515
Gma19g02375 405 PANTHER BNAA09G39300D PROTEIN 1 405 - -
Gma19g02375 405 SUPERFAMILY F-box domain 39 144 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02375 Gma-Chr19 52355256 52358248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02375 - - gmx:100779721 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02375 19 52355256 52358248 Gma19g02375 19 52355256 52358248 ECH
Gma19g02375 19 52355256 52358248 Gma03g02335 03 48573369 48577132 GST
Gma19g02375 19 52355256 52358248 Gma07g00571 07 5516793 5517572 PCT
Gma07g00571 07 5516793 5517572 Gma19g02375 19 52355256 52358248 PCT