Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01924 ATGCAGAAAATGGCGTACACGTTTTCGTTTCCGGAGGAGGTGCTGGAGCACGTGTTCTCGTTCATATGGAGCGAGAGGGACAGGAACGCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGAGGTGGTGCAGGAGGAAGGTTTTCGTGGGGAACTGCTACGCGGTGAGCCCTTTGATGGTGATCAAGCGCTTCCCGGAGCTGAGATCCATTGCGCTCAAAGGGAAGCCGCACTTCGCGGACTTCAATTTGGTCCCCGAGGGTTGGGGAGGTTACGTTTGCCCCTGGATCGCCGCCATGGCCCGGGCCTTCCCCTGCCTCGAAGAGATCAGGCTCAAGAGGATGGTCATCACCGACGAGAGCTTGGAGCTCATCGCTAAGTCCTTCAAGAACTTCAAGGTCTTGGTTCTCACTTCCTGTGAGGGTTTTACTGCCGATGGACTTACCGCCATTGCTTCCAACTGCAGGAATCTAAGGGAATTGGACTTGCAGGAGAGTGAAGTGGAGGACCTTAGTGGGCACTGGCTAAGCCATTTTCCTGATTCCTACACTTCATTAGTTTCACTTAACATCTCTTGCTTAAACCATGAGGTGAGTTTATCTGCATTAGAGCGTCTGCTTGGGAGGTGTCGGAACCTGCGGACCCTCCGTCTCAATCGTGCCGTGCCCCTTGATAGACTACCCAACCTACTTCTCCGGTGTCCTCAGCTGGTTGAGTTAGGCACAGGAGTCTATTCAACTGAGATGCGACCGGAGGTCTTCTCAAACCTGGAAGCAGCATTTTCTGGTTGCAAGCAGTTGAAGAGCTTGTCTGGCTTTTGGGATGTGCTTCCATCCTACCTTCCAGCTGTCTACCCCATCTGCTCCAGGCTAACATCGCTAAACTTGAGTTATGCTATTATTCAAAGCTCTGATCTTATTAAGCTTATCAGTCAATGCCCAAATTTGTTGCGATTATGGGTGCTGGATTACATAGAAGATGCTGGTCTTTATGCCCTTGCTGCATCATGTAAGGATCTAAGGGAGTTAAGGGTGTTTCCGTCTGAGCCGTTTGGTTTAGAACCAAATGTTTCATTGACAGAACAGGGCCTTGTCTCTGTGTCTGAAGGTTGCCCCAAGCTCCAATCGGTTCTATATTTTTGTCGACAAATGTCGAATGCAGCCCTACATACAATTGCACGGAACAGGCCTAATTTGACTCGTTTTAGGCTTTGTATTATTGAGCCTCGAACTCCTGACTATCTAACCCTGGAACCCCTGGATTCTGGTTTTGGAGCTATTGTAGAGCAATGCAAGGATCTTCAACGCCTATCCCTGTCTGGTCTTCTTACTGACCGTGTTTTTGAGTATATTGGGACTTATGCGAAGAAGCTGGAGATGCTATCTGTGGCTTTTGCTGGAGATAGTGATTTGGGACTTCACCATGTGCTGTCAGGGTGTGATAATCTTAGGAAGCTGGAGATAAGGGATTGCCCCTTTGGTGACAAGGCCCTTTTGGCAAATGCTGAAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCCTGCTCAGTGAGTTATGGAGCGTGTAAGCTACTGGGTCAGAAAATGCCCAGACTCAACGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCAGATGATTGTCCTGTTGAGAAGCTTTATATATACAGGACTGTTGCTGGGCCAAGGTTGGACATGCCTGGTTTTGTGTGGACAATGGAAGATGATTCTTCACTAAGGCTTGAGTGA 1761 0.4912 MQKMAYTFSFPEEVLEHVFSFIWSERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPLMVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMARAFPCLEEIRLKRMVITDESLELIAKSFKNFKVLVLTSCEGFTADGLTAIASNCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLNISCLNHEVSLSALERLLGRCRNLRTLRLNRAVPLDRLPNLLLRCPQLVELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSYAIIQSSDLIKLISQCPNLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSEPFGLEPNVSLTEQGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNLTRFRLCIIEPRTPDYLTLEPLDSGFGAIVEQCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAEKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPDDCPVEKLYIYRTVAGPRLDMPGFVWTMEDDSSLRLE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01924 586 SUPERFAMILY RNI-like 85 519 - -
Gma03g01924 586 Gene3D - 2 46 - -
Gma03g01924 586 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 8 578 - -
Gma03g01924 586 SUPERFAMILY F-box domain 6 42 IPR036047 GO:0005515
Gma03g01924 586 Gene3D Ribonuclease Inhibitor 47 577 IPR032675 -
Gma03g01924 586 Pfam Transport inhibitor response 1 protein domain 67 113 IPR041101 -
Gma03g01924 586 SMART fbox_2 10 51 IPR001810 GO:0005515
Gma03g01924 586 Pfam F-box 8 48 IPR041567 -
Gma03g01924 586 SUPERFAMILY RNI-like 179 405 - -
Gma03g01924 586 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 8 578 - -
Gma03g01924 586 SMART LRR_CC_2 432 455 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 105 129 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 289 313 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 130 155 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 372 396 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 481 505 IPR006553 -
Gma03g01924 586 SMART LRR_CC_2 314 337 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01924 Gma-Chr3 45127359 45131154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01924 K14485 - gmx:100816241 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01924 03 45127359 45131154 Gma03g01924 03 45127359 45131154 ECH
Gma19g01966 19 48762949 48766117 Gma03g01924 03 45127359 45131154 GST
Gma03g01924 03 45127359 45131154 Gma10g00208 10 1900075 1903385 PCT
Gma03g01924 03 45127359 45131154 Gma02g01391 02 16078401 16081665 PCT
Gma10g00208 10 1900075 1903385 Gma03g01924 03 45127359 45131154 PCT
Gma02g01391 02 16078401 16081665 Gma03g01924 03 45127359 45131154 PCT