Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01391 ATGCGGCCGAGAGTAGCGTACTCGTTCCCTGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTGAGTGCGACAAGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCGTCGGAAACTGCTACGCGGTCTCTCCGGCCACCGTCGTCAACCGCTTCCCCAAGGTTAGATCCATCGCCATCAAGGGGAAGCCGCACTTCGCCGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCCTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCATCGCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAAGTCTTGGTCCTCACCTCTTGCGAGGGCTTCACCACTGATGGACTTGCAGCCATTGCTGCCAATTGCAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGACGACATCTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCACTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTAGTAGGTGTCCCAATCTCCAGACGCTCCGCCTCAACCGTGCTGTGCCACTAGACAGGCTTGCCACTCTTCTTCGCGGTGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCTTACACGACAGAGATGCGACCGGAGGTCTTCACAAACCTTGCGGAGGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTATCTGGATTTTGGGACGTGCTCCCTTCCTACCTTCCAGCTGTCTATCCTATTTGCTCCAACCTGACTTCACTGAACTTGAGTTATGCAACTATTCAAAGCCCTGATCTTATCAAGCTTGTTGGTCAATGTGAGAGTTTGCAGCGGTTATGGGTGCTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCATCCTGTAAGGATCTAAGGGAGTTGAGGGTGTTTCCGTCCGACCCGTTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTCGTTTCGGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGGCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAGCAGGCCTAATATGACACGTTTTAGACTATGTATTATTGAGCCTCGAGCTCCTGACTATCTCACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGACTTTCCCTTTCTGGGCTTCTAACTGACCGTGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTATGGAGCATGTAAATTGCTGGGTCAGAAAATGCCAAGACTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGTTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGCAAGATGATTCTGCATTAAGGATTTCTTGA 1758 0.5085 MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVELGTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01391 585 SUPERFAMILY F-box domain 7 43 IPR036047 GO:0005515
Gma02g01391 585 SMART LRR_CC_2 371 395 IPR006553 -
Gma02g01391 585 SMART LRR_CC_2 431 454 IPR006553 -
Gma02g01391 585 SMART LRR_CC_2 480 504 IPR006553 -
Gma02g01391 585 SMART LRR_CC_2 129 154 IPR006553 -
Gma02g01391 585 Gene3D - 1 45 - -
Gma02g01391 585 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 576 - -
Gma02g01391 585 Pfam F-box 7 47 IPR041567 -
Gma02g01391 585 SUPERFAMILY RNI-like 84 517 - -
Gma02g01391 585 Pfam Transport inhibitor response 1 protein domain 66 112 IPR041101 -
Gma02g01391 585 Gene3D Ribonuclease Inhibitor 46 576 IPR032675 -
Gma02g01391 585 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 6 576 - -
Gma02g01391 585 SMART fbox_2 9 50 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01391 Gma-Chr2 16078401 16081665 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01391 K14485 - gmx:100809794 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01391 02 16078401 16081665 Gma02g01391 02 16078401 16081665 ECH
Gma10g00208 10 1900075 1903385 Gma02g01391 02 16078401 16081665 GST
Gma19g01966 19 48762949 48766117 Gma02g01391 02 16078401 16081665 PCT
Gma03g01924 03 45127359 45131154 Gma02g01391 02 16078401 16081665 PCT
Gma02g01391 02 16078401 16081665 Gma19g01966 19 48762949 48766117 PCT
Gma02g01391 02 16078401 16081665 Gma03g01924 03 45127359 45131154 PCT