Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01482 ATGAATGCTAGACGAGACAATCGTAACAATAGAGTTTCCCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCATCTGTTTACTCCTCTTCTCATGAAATTGATGAACATGATAATGAGCAGGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTATCAGGTGATATAAATGAGGAGGTGGATAGCCATAACCGCATGCTGGATCGAATGGGGAATGATATGGATTCATCAAGAGGGGTCCTTTCGGGCACTATGGACAAATTTAAAATGGTATTCGAGACCAAATCCAACCAGAGAATGTTCACGCTTGTAGCATCCTTTGTTGTGCTCTTTCTTATAATATACTACCTCACTAGGTAA 375 0.4053 MNARRDNRNNRVSLFDGIEEGGIRASSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSNQRMFTLVASFVVLFLIIYYLTR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01482 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Gma03g01482 124 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Gma03g01482 124 CDD SNARE_Bet1 37 94 IPR039899 -
Gma03g01482 124 SMART tSNARE_6 29 96 IPR000727 -
Gma03g01482 124 SUPERFAMILY SNARE fusion complex 30 96 - -
Gma03g01482 124 Gene3D - 42 105 - -
Gma03g01482 124 PANTHER BET1-LIKE SNARE 1-1 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01482 Gma-Chr3 41062686 41066231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01482 K08504 - gmx:100814836 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01482 03 41062686 41066231 Gma03g01482 03 41062686 41066231 ECH
Gma03g01482 03 41062686 41066231 Gma10g00084 10 807697 815288 PCT
Gma03g01482 03 41062686 41066231 Gma20g00869 20 34781624 34787106 PCT
Gma10g00326 10 3075190 3077561 Gma03g01482 03 41062686 41066231 PCT
Gma13g01010 13 24234661 24238034 Gma03g01482 03 41062686 41066231 PCT