Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00084 ATGAGTTACCGAAGAGATAATCGCTCCTCCAGATCATCACTTGTAGATGGTTTTGATAGTCTGGAGGAGGGTGGTCTAAGGGCTTCTTCTTCTTACTCACGCGAAATTAATGAGCATGATAATGATAAAGCCATAGAGAATTTGCAGGACAGAGTTTCCTTTCTGAAACGGTTAACAGGTGATATACATGAGGAGGTTGAGAGTCATAACCAGTTGCTTGATCGGGTGGGTAACAAAATGGACGGATCAAGGGGTGTGATGATGGGAACCATGGATCGATTTAAAAAGGTTTTTGAGAAGAAATCAGCAAGGAAAACATGCTCACTTGTGGGGTATTTCACACTTGCCTTCATATTCATATACTATCTTATTAGGATGCTTGGATACTTTACACTTGGGTAA 402 0.408 MSYRRDNRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNDKAIENLQDRVSFLKRLTGDIHEEVESHNQLLDRVGNKMDGSRGVMMGTMDRFKKVFEKKSARKTCSLVGYFTLAFIFIYYLIRMLGYFTLG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00084 133 Gene3D - 42 106 - -
Gma10g00084 133 PANTHER GOLGI SNARE BET1-RELATED 1 127 IPR039897 GO:0015031|GO:0030173
Gma10g00084 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Gma10g00084 133 CDD SNARE_Bet1 38 96 IPR039899 -
Gma10g00084 133 SUPERFAMILY SNARE fusion complex 34 97 - -
Gma10g00084 133 PANTHER BET1-LIKE SNARE 1-2 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00084 Gma-Chr10 807697 815288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00084 K08504 - gmx:100818014 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00084 10 807697 815288 Gma20g00869 20 34781624 34787106 GST
Gma03g01482 03 41062686 41066231 Gma10g00084 10 807697 815288 PCT