Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01010 ATGAATGCTAGGAGAGATGGTCGTAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCGTCTCTTTACTCCTCAACTTCTTCCCATGAAATTGATGAACATGATAATGAACAAGCATTGGATGGATTGCAAGATAGAGTTAATCTGCTGAAAAGATTGTCAGGTGATATAAATGAGGAAGTGGATAGTCATAACCGGATGCTGGATCGTATGGGAAACGATATGGATTCTTCGAGAGGAGTCCTCTCAGGCACTATGGATAAATTCAAAATGGTATTTGAGACAAAATCCAGCCGAAGAATGTTTTCACTTGTAGCATCCTTTGTCGTGCTTTTTCTTATAATATACTATCTGACTAGTGGACAAGAAAATTGA 393 0.3919 MNARRDGRNNRVALFDGIEEGGIRASSLYSSTSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVLFLIIYYLTSGQEN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01010 130 Gene3D - 44 107 - -
Gma13g01010 130 PANTHER BET1-LIKE SNARE 1-1 1 125 - -
Gma13g01010 130 CDD SNARE_Bet1 39 96 IPR039899 -
Gma13g01010 130 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 36 98 IPR000727 -
Gma13g01010 130 SMART tSNARE_6 31 98 IPR000727 -
Gma13g01010 130 PANTHER GOLGI SNARE BET1-RELATED 1 125 IPR039897 GO:0015031|GO:0030173
Gma13g01010 130 SUPERFAMILY SNARE fusion complex 33 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01010 Gma-Chr13 24234661 24238034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01010 K08504 - gmx:100500329 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00326 10 3075190 3077561 Gma13g01010 13 24234661 24238034 GST
Gma13g01010 13 24234661 24238034 Gma03g01482 03 41062686 41066231 PCT