Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01563 ATGCTGAGCGTGGTGCGCGTGCACCTGCCCTCGGAAATTCCCATTGTAGGCTGCGAGCTCACGCCCTACGTGCTCCTCCGCCGCCCCGACAAGACCGTCTCCACCGACGATGTTCCCGAAACCACACCCTTAGACGGTCATTTCCTGCGCTACAAATGGTATCGTGTACAGAGTGATAAAAAAGTTGCTGTCTGTAGCATACATCCATCTGAGCAAGCCACCCTGCAATGCCTAGGCTGTGTTAAGGCCAAAATACCTGTTTCCAAGAGTTACCATTGCACCACAAAGTGTTTTTCGGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCCGCAAGTGCTCTTAATGAAAATGGAAACGAGGAGGAGGAGGTATTTGGGCGCTTTAATAGTACTGGGTCTGGGGCAACCAATTCCAGCTTATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGGTCTGCAACACCTTTGTATCCAGCAGCTATCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGACGATCCAAGACTTACACCCCTACTGCTGATGACGTTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCTGTGGGGCATGCCAACACTATACTAACTTCACGTGTCATTCCTGCTCCCTCGCCTATTCCACGCCGAATAATATCTGTTGATGGGATGGCACATTTAGATGTGGATGGGAGAATGACATCTTCAGGAACTTTTACTGTTCTATCATACAATGTATTGTCTGAAGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGTTACGGGAAATTGTTGGTTACCGTCCAGACATTATTTGTCTTCAGGAGGTTCAAAGCGATCATTATGACGAATTTTTTTCTCCCGAATTAGACAAACATGGATATTATGGTCTTTACAAGAGAAAAGAGGTTGTGTACAGTGGCAACACAAATACAATTGATGGGTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTTAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAATCTTTGACAGAGGCTACAATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTTGCCCTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCATTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTCCCCCAAGATCTAAAGGATGTGAAACTCTGGCAGGTTCATACTCTCTTAAAAGGGTTGGAAAAAATAGCTGCAAGCGCAGACATTCCGATGTTGGTTTGTGGAGATTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCGCTTAACATTCTACGTCCTCACAGCAAGTTGGTTCATCAGTTACCACTGGTCAGTGCATACTCATCTTTTGCTAGAACAGTTGGCCTTGGATATGAGCAGCATAAAAGGAGAATGGATGGTGGAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTGGAGTTACTGGATGAGGAGAGTTTGAGGAAGGACACAGCACTTCCTTCACCTGAATGGTCCTCAGATCACATAGCTCTCTTAGCCGAATTTCGCTGCTGCAAGAATAAATCTAGGCGTTGA 1800 0.4406 MLSVVRVHLPSEIPIVGCELTPYVLLRRPDKTVSTDDVPETTPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSGATNSSLSASASSASLTNGSATPLYPAAITQRSGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGHANTILTSRVIPAPSPIPRRIISVDGMAHLDVDGRMTSSGTFTVLSYNVLSEAYASNDLYNYCPSWALSWPYRRQNLLREIVGYRPDIICLQEVQSDHYDEFFSPELDKHGYYGLYKRKEVVYSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEQHKRRMDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01563 599 Pfam Endonuclease/Exonuclease/phosphatase family 253 583 IPR005135 GO:0003824
Gma02g01563 599 SUPERFAMILY DNase I-like 245 593 IPR036691 -
Gma02g01563 599 CDD Deadenylase_CCR4 252 592 - -
Gma02g01563 599 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 596 - -
Gma02g01563 599 Gene3D Endonuclease/exonuclease/phosphatase 220 598 IPR036691 -
Gma02g01563 599 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01563 Gma-Chr2 31307421 31314161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01563 K12603 - gmx:100819402 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01563 02 31307421 31314161 Gma02g01563 02 31307421 31314161 ECH
Gma19g01948 19 48615415 48619930 Gma02g01563 02 31307421 31314161 PCT
Gma03g01908 03 44978427 44985100 Gma02g01563 02 31307421 31314161 PCT
Gma02g01563 02 31307421 31314161 Gma19g01948 19 48615415 48619930 PCT
Gma02g01563 02 31307421 31314161 Gma03g01908 03 44978427 44985100 PCT