Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00296 ATGAACCCGTTTTCTTCAGGAACGCGTTTGAGGGACATGATTCGGGCCATACGTGCTTGTAAGACTGCAGCAGAAGAACGAGCTGTTGTAAGAAAAGAATGTGCTGCCATTCGCGCTGCAATAAATGAAAATGATAATGACTATAGACATCGGAATCTGGCTAAGCTAATGTTCATCCACATGCTTGGTTACCCCACACATTTTGGTCAAATGGAATGCCTCAAGTTGATAGCATCTCCTGAATTTCCAGAGAAGAGAATAGGTTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCACACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCCCGTGATCTTGCACCAGAGGTTGAGAGATTGCTGCAATTTCGAGATCCAAATATTCGCAAGAAGGCAGCATTATGCTCTATAAGGATCATAAAGAAAGTTCCAGACTTGGCAGAAAATTTTATCAATCCTGCTACTTCCTTACTCAGAGAGAAGCATCATGGGGTTTTGATCACTGGGGTTCAGCTTTGTACAGATCTGTGTAAAATTAGCACTGAAGCTCTTGAACATATTAGGAAGAAATGCACAGATGGTTTGGTCAGAACTCTTAAGGATCTAGCCAATAGTCCATATTCACCAGAGTATGATATTGCTGGTATCACAGACCCATTTCTGCACATCAGATTGCTAAAACTTTTGCGAGTGTTGGGTGAAGGCAATGCTGATGCTAGCGACACCATGAATGACATACTTGCCCAGGTGGCTACGAAGACTGAGTCAAATAAAGTTGCAGGGAATGCCATTTTATATGAATGTGTTCAAACAATAATGAGCATTGAAGATAATGGTGGCTTACGTGTACTTGCCATTAATATCCTGGGAAGATTCTTGTCAAACCGTGACAACAATATCAGATATGTGGCATTAAACATGCTAATGAAGGCTGTAACTGCTGATGCTCAGGCAGTACAGAGGCACCGTGCAACCATTATAGAATGTGTGAAGGATTCAGATGCTTCGATTCGGAAAAGAGCCCTTGAACTTGTTTATGTTTTGGTGAATGAGACTAATGTGAAGCCCTTGGCAAAAGAGCTTATAGATTATCTGGAAGTCAGTGATCTTGATTTCAGAGAGGACCTTACTGCCAAAATTTGCTCCATTGTAGCAAAGTATTCCCCAGAGAAGATCTGGTATATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAACTTTGTAAAAGATGAAGTATGGTATGCCTTAGTTGTTGTGATAAGCAATGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAGAGCATTTCAAACGTCAGCTGAACAGGAGACTCTAGTTCGAGTTACAGTGTGGTGCATTGGGGAGTATGGTGACATGTTAGTCAATAATGTTGGAATGCTAGACATAGAAGATCCAATAACAGTGACTGAGTCCGATGCAGTTGATGTCATAGAGATTGCTATAAAACGCCATGCATCAGATCTTACCACAAAAGCGATGGCTTTGGTTGCACTATTAAAGCTCTCTTCACGTTTCCCTTCATGTTCAGAGAGGATCAAAGAAATTATTGTTCAGTTCAAAGGGAGCTTTGTGCTAGAATTGCAGCAGAGGGCTATTGAATTCAGTTCGATTATTTCAAAGCATCAAAATATTAGGTCTACACTTGTAGAAAGGATGCCAGTTTTGGATGAGGCAACTTACATTGGTAGGAGGGCTGGGTCTCTGCCAGGCGCAGCTTCAACTCCAACTGCACCTTCATTTAATCTTCCAAATGGAGTAGCCAAACCTGTGGCTCCTCTTGTAGATCTACTTGATCTAAGTTCAGATGATGCTCCTGCTCCGAGCTCTTCTGGTGGAGGAGATATTCTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCACAACAATCTGTTGCTGGCCAAGCTTCAAAAAGTGGCAACGATGTTCTTTTGGATCTTCTGTCTATCGGATCACCTTCTGCTGAAAGCAGCTCATCTACAGTAGACATCTTATCCTCCAATTCGAGTAACAAAGCACCAGTTTCTTCATCATTGGATGGTCTCTCATCTCTTTCACTTTCGACAAAAACAACTTCAAATGCTGCTCCTATGATGAATTTATTGGATGGTTTTGCCCCCAGCCCGCCAACAGTAGAAAACAATGGATCGGTTTATCCATCAGTAACTGCATTTGAGAGCAGCTCCTTGAGGTTGACATTCAATTTCTCAAAACAACCAGGAAACCCACAAACAACAGTTATCCAGGCTACTTTTATGAATTTGTCCTCCAATTCATATACAGATTTTGTTTTTCAAGCAGCAGTTCCTAAGTTTCTTCAATTGCACTTAGATCCAGCTAGCAGCAATACTCTTCCCGCAAATGGGTCCATAACCCAAAGTTTGAAAATTACTAATAGCCAACATGGGAAGAAATCTCTTGTCATGCGTATAAGGATAGCATACAAGATAAATGGCAAGGATACACTGGAGGAAGGACAAGTCAATAACTTTCCTCATGCACTCCATAATTATTGGTGCGGTTTTCATGTTTCATTCCTTCAATTGAGGAAGGTGATTTATGTACATTAG 2685 0.4112 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAINENDNDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPEFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCKISTEALEHIRKKCTDGLVRTLKDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGNADASDTMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATIIECVKDSDASIRKRALELVYVLVNETNVKPLAKELIDYLEVSDLDFREDLTAKICSIVAKYSPEKIWYIDQMLKVLSEAGNFVKDEVWYALVVVISNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVIEIAIKRHASDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGSFVLELQQRAIEFSSIISKHQNIRSTLVERMPVLDEATYIGRRAGSLPGAASTPTAPSFNLPNGVAKPVAPLVDLLDLSSDDAPAPSSSGGGDILQDLLGVDLSPASQQSVAGQASKSGNDVLLDLLSIGSPSAESSSSTVDILSSNSSNKAPVSSSLDGLSSLSLSTKTTSNAAPMMNLLDGFAPSPPTVENNGSVYPSVTAFESSSLRLTFNFSKQPGNPQTTVIQATFMNLSSNSYTDFVFQAAVPKFLQLHLDPASSNTLPANGSITQSLKITNSQHGKKSLVMRIRIAYKINGKDTLEEGQVNNFPHALHNYWCGFHVSFLQLRKVIYVH 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00296 894 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 5 872 - -
Gma02g00296 894 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 5 872 - -
Gma02g00296 894 Pfam Adaptin N terminal region 27 579 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gma02g00296 894 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 755 870 IPR008153 -
Gma02g00296 894 PIRSF AP1_gamma 6 873 IPR017107 GO:0005794|GO:0016192|GO:0030121
Gma02g00296 894 SMART alpha_adaptinc2 752 870 IPR008152 GO:0006886|GO:0016192
Gma02g00296 894 Pfam Adaptin C-terminal domain 758 870 IPR008152 GO:0006886|GO:0016192
Gma02g00296 894 SUPERFAMILY Clathrin adaptor appendage domain 732 873 IPR013041 -
Gma02g00296 894 SUPERFAMILY ARM repeat 25 592 IPR016024 -
Gma02g00296 894 MobiDBLite consensus disorder prediction 691 721 - -
Gma02g00296 894 Gene3D - 2 594 IPR011989 -
Gma02g00296 894 Gene3D - 743 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00296 Gma-Chr2 3094065 3106095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00296 K12391 - gmx:100815152 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00296 02 3094065 3106095 Gma02g00296 02 3094065 3106095 ECH
Gma01g00299 01 3425593 3438558 Gma02g00296 02 3094065 3106095 GST
Gma02g00296 02 3094065 3106095 Gma18g01225 18 19569222 19582185 PCT
Gma18g01225 18 19569222 19582185 Gma02g00296 02 3094065 3106095 PCT