Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00244 ATGGCTCTATCACGTTTGTCCCACCGCAGCATCGGATCCACTCTCACAAAACCCTTCTCCGCCGCCGCCGCCTCCGCCGCCTCCTCCCGTTCGATCTCCACCTCGGACACCCCCTTAACAATCGAGACCTCTGTCCCCTTCACCGCGCACAACTGCGACCCCCCGTCACGCGCGGTCGCGACCTCCTCCTCGGAGCTCCTCACCTTCTTCCGCGACATGGCCCTGATGCGGCGCATGGAGATCGCCGCTGACTCCCTCTACAAGGCCAAGCTCATCCGCGGCTTCTGCCACCTCTACGACGGCCAGGAGGCCGTCGCCGTCGGCATGGAGGCCGCCATCACTAAAAAGGACTCCATCATCACCGCCTACCGCGACCATTGCATCTTCGTCGGCCGCGGTGGCACGCTCCTGGAGGTCTTCGCCGAGCTCATGGGCCGCAAGGAAGGATGCTCGAAGGGGAAGGGCGGGTCCATGCATTTTTATAAGAAGGAGAGTGGGTTTTATGGTGGGCATGGGATTGTTGGGGCGCAGGTTCCGTTGGGGTGTGGGTTGGCGTTTGCTCAGAAGTATTCTAAGGACGAGAGTGTCACTTTTGCTATGTATGGAGATGGCGCTGCCAATCAGGGACAGCTCTTTGAGGCGCTTAATATCGCCGCGCTTTGGGATCTTCCTGCTATTTTGGTCTGCGAGAATAATCACTATGGGATGGGGACTGCGGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTATAAGCGTGGGGATTACGTGCCTGGCTTGAAGGTTGATGGTATGGATGTTCTTGCTGTTAAACAAGCTTGCAAATTTGCAAAGGAACATGCTTTGAAGAATGGACCCCTTATTCTTGAAATGGACACTTACAGATACCATGGACACTCTATGTCTGATCCTGGCAGCACATACCGGACACGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGGTATTGTCTCATGATATTGCTGCTGAAAAGGAGCTAAAGGACATTGAGAAAGAAGTCAGAAAAGAAGTTGACGAAGCCATTGCTAAAGCAAAGGAGAGTCCAATGCCAGATCCATCTGATCTATTTACCAATGTCTATGTTAAAGGTTACGGAGTTGAGACATTTGGTGCTGATAGGAAAGAAGTGAGAGCTACTTTACCATAA 1191 0.5298 MALSRLSHRSIGSTLTKPFSAAAASAASSRSISTSDTPLTIETSVPFTAHNCDPPSRAVATSSSELLTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDSIITAYRDHCIFVGRGGTLLEVFAELMGRKEGCSKGKGGSMHFYKKESGFYGGHGIVGAQVPLGCGLAFAQKYSKDESVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPMPDPSDLFTNVYVKGYGVETFGADRKEVRATLP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00244 396 Gene3D - 24 391 - -
Gma02g00244 396 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 61 377 IPR029061 -
Gma02g00244 396 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 8 396 - -
Gma02g00244 396 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 64 376 IPR017597 GO:0004739|GO:0006086|GO:0043231
Gma02g00244 396 CDD TPP_E1_PDC_ADC_BCADC 69 359 - -
Gma02g00244 396 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 8 396 - -
Gma02g00244 396 MobiDBLite consensus disorder prediction 299 319 - -
Gma02g00244 396 Pfam Dehydrogenase E1 component 72 367 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00244 Gma-Chr2 2458875 2464399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00244 1 396 Acyl Lipid Metabolism Gene Families AT1G24180 80.556 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00244 K00161 - gmx:100816737 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00244 02 2458875 2464399 Gma02g00244 02 2458875 2464399 ECH
Gma01g00345 01 4091913 4097365 Gma02g00244 02 2458875 2464399 GST
Gma02g00244 02 2458875 2464399 Gma18g01180 18 18134203 18154043 PCT
Gma18g01180 18 18134203 18154043 Gma02g00244 02 2458875 2464399 PCT