Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00267 ATGGACTCTTCTAAGAGACTTACATTTTCGGAACCCTTTATGTCACAGGGGAGAAAGGTGATTTCTGGGTTCAGTTTGGGCGTTGGAGTTTCTCTCCTTTTCCTCACTCTTATCTTGCTCAACAGCACTTCCCTCTCCGTTCCCAAGGTTCAAGTGTTTCTCCAAGGATCCGATTCCAATTCCACTTCTTCGTTCTCGTGGCGTTTTCCCTTCACAACCGCTCTTTCTTCCAACGGTTCCGTGAGTTCTCTGCATAGGGTTGACGTGAGGGTGTCGTCAAGTGAGGGTTCGGAGAAAACCCTTTTGGGAAATCTCACTGGGGATCAGAAAAACGCAAGCTTGTATGATGGGCATGAGGAAGATGAACATTGTTGTTCTTTGAAGAATGTTACTTTGGCAGGGAAGGAAAATGCGCACGTGGGAAATTCGTCATGCAATGGTGATGGTGTGGGAAAGTGTGAAGATGGGTTGTTGTTTAAGGAAAGTAATAATGATAGTGTTAGTGTTGGTGGTTTGCTTGGGGAAtgtgacatctttgatgggaaatgggtgagggatgaattcaagccttactatccattggggtcttgtccaaatgttgatagggattttgattgccatcttaatggaaggcctgatagtgattatgtcaagtggaaatggcagccaaatgggtgtgacattccaagTTTGAATGCAACTGATTTTCTGGAAAAGTTGCGAGGGCAGAAGCTGGTTTTTGTGGGGGATTCACTGAACAGAAACATGTGGGAGTCCATGGTGTGTATCCTACGTCAAAGTGTCAAGGACAAGAAACGTGTTTTTGAAATTTCAGGAAAAACAGAATTTAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGCAAGTTTCTGGTACATCCATGAGATTTTCCTTAGTATATATCTTGATTATAATTGTTCAGTAGATTTTGTTAGTTCACCATTCATTGTTCAAGAGTCAACTTTCAAAGGCATAAATGGGTCCTTTGAGACATTAAGATTGGATTTGATGGACCAGACAAGTACCACCTATCATGATGCTGATATCATAGTCTTCAATACAGGCCATTGGTGGACCCACGAGAAAACATCGAGGGGAGAAGACTATTATCAAGTAGGCAACCATGTATACCCCAGACTCAAAGTTCTGGATGCATATACAAGGGCATTGACCACTTGGGCTAGATGGGTTGACAAAAATATTGATGCCAACCGAACTCAGGTTTTCTTCAGAGGATACTCAGTAACCCATTTCAGGGGTGGGCAATGGAATTCAGGCGGAAAGTGCCACAAAGAAACTGAGCCAATATCTAATGGAAAGCACTTACGCAAGTATCCCTCAAAAATGAGGGCTTTTGAGCATGTGGTCATCCCAAAGATGAAAACCCCAGTGATATATATGAACATTAGTAGGCTTACAGATTACAGAAAAGATGGGCATCCTTCTATATACAGAATGGAGTACAAGACAGCAGAAGAACGGACCGCTGCTGAACAACACCAAGATTGCAGTCATTGGTGTTTGCCTGGAGTACCTGATACTTGGAATGAATTACTGTATGTTTCTCTCTTGAAATATGGTAAAGGCCATTGGAAAAGCTGA 1623 0.3814 MDSSKRLTFSEPFMSQGRKVISGFSLGVGVSLLFLTLILLNSTSLSVPKVQVFLQGSDSNSTSSFSWRFPFTTALSSNGSVSSLHRVDVRVSSSEGSEKTLLGNLTGDQKNASLYDGHEEDEHCCSLKNVTLAGKENAHVGNSSCNGDGVGKCEDGLLFKESNNDSVSVGGLLGECDIFDGKWVRDEFKPYYPLGSCPNVDRDFDCHLNGRPDSDYVKWKWQPNGCDIPSLNATDFLEKLRGQKLVFVGDSLNRNMWESMVCILRQSVKDKKRVFEISGKTEFKKKGVYAFRFEASFWYIHEIFLSIYLDYNCSVDFVSSPFIVQESTFKGINGSFETLRLDLMDQTSTTYHDADIIVFNTGHWWTHEKTSRGEDYYQVGNHVYPRLKVLDAYTRALTTWARWVDKNIDANRTQVFFRGYSVTHFRGGQWNSGGKCHKETEPISNGKHLRKYPSKMRAFEHVVIPKMKTPVIYMNISRLTDYRKDGHPSIYRMEYKTAEERTAAEQHQDCSHWCLPGVPDTWNELLYVSLLKYGKGHWKS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00267 540 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 538 IPR029962 GO:0016413
Gma01g00267 540 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 228 527 IPR026057 GO:0016740
Gma01g00267 540 Pfam PMR5 N terminal Domain 175 227 IPR025846 -
Gma01g00267 540 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00267 Gma-Chr1 3046769 3051053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00267 - - gmx:100804622 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00267 01 3046769 3051053 Gma01g00267 01 3046769 3051053 ECH
Gma17g01184 17 10369425 10373710 Gma01g00267 01 3046769 3051053 PCT
Gma05g00426 05 4033922 4037989 Gma01g00267 01 3046769 3051053 PCT