Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0691 ATGGATCCAGTTTCGTCATCAAAAGGGGGAGTTGGAAGTGTACCTTATGACATTGCAAGCCAAATGGGGTTTATTTGGCAGCGAACCGGGGCACCTCTGATCGCTCCATTGCTGAAATTGATGGTGATTTTGTGTCTCGCCATGTCTGTGATGCTATTTGTGGAGAGAGTTTATATGGGCGTAGTCATAGTTCTTGTGAAGTTGTTTGGGCGAAAGCCAGAAAAGCGTTACAAATGGGAGGCACTGAATGATGATGATGTCGAGCTTGGCAACTCTGGCTACCCTATGGTTCTTGTGCAGATTCCAATGTACAATGAGATTGAGGTGTACCAGTTGTCGATAGGAGCTGCATGTGGGCTATCATGGCCATCAGATAGGATTATTATTCAAGTTCTTGATGACTCTACAGATCCTCTCATCAAGAATTTGGTAGAAGCCGAATGCAAGAGATGGGGAAGCAAAGGCATAAACATAAAGTATGAGATAAGGGAGAACAGAAAAGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAGCACAAGTACGTTAAACTCTGTGACTATGTCGCCATTTTCGATGCCGATTTCCAACCCGACCCTGATTTCCTTTTTCGCGCCATTCCCTTCCTCTTTCACAACCCACAAATCGCTCTCGTCCAAGCTCGCTGGAAATTCGTTAATGCTGATGAATGCTTAATGACAAGAATGCAACAGATGTCACTGGATTACCATTTCATTGTTGAGCAGGAAGTGGGGTCCTCCACCTATGCCTTTTTTGGTTTCAATGGCACAGCTGGTGTTTGGAGACTTTCTGCACTAAATGAGGCTGGAGGATGGAAGGACCGCACAACAGTTGAAGACATGGACCTGGCTGTAAGGGCTGGTCTCAAGGGCTGGGAATTTCTCTATCTTAGTGACCTTAAGGTGAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTATCAGCAACACCGATGGTCTTGTGGCCCAGCTAATCTCTTCAGGAAAATGGCAATGGAAATCATAAGAAACAAGAAAGTATCCATGTGGAAGAAGTTCTACGTGATTTATAGCTTTTTCTTTGTCCGGAAGATCATAGCCCATGTGGTTACATTTGTGTTTTACTGTGTTGTTTTGCCTGCAACTGTTCTAGTTCCTGAAGTCGAAGTTCCAAAGTGGGGTGCTGTTTATATACCTTCTACCATTACACTCCTTAATGCCGTTGGAACTCCAAGATCACTCCACCTATTGGTATTCTGGATCCTATTTGAAAATGTCATGTCAATGCATCGGACCAAGGCAACAGTTATAGGTTTGATGGAGGCAGGGAGAGCAAATGAATGGGTGGTTACTGAGAAATTAGGGGATGCTCTTAAAACAAAATCAGGAGGCAAAGCATCAAGGAAGTCTCGTATAAGGATTGGTGAAAGAATACATTTGCTGGAACTTGGTGTTGGGGCCTACCTCTTCTTTTGTGGATGCTACGATTTGACCTTTGGGAAGAACCATTACTTCATATACCTCTTCCTGCAATCTATTGCCTTCTTTATTGCGGGGGTTGGCTACATTGGCGTCTTTGTTTCCAATTCTTAG 1596 0.4398 MDPVSSSKGGVGSVPYDIASQMGFIWQRTGAPLIAPLLKLMVILCLAMSVMLFVERVYMGVVIVLVKLFGRKPEKRYKWEALNDDDVELGNSGYPMVLVQIPMYNEIEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPLIKNLVEAECKRWGSKGINIKYEIRENRKGYKAGALKEGMKHKYVKLCDYVAIFDADFQPDPDFLFRAIPFLFHNPQIALVQARWKFVNADECLMTRMQQMSLDYHFIVEQEVGSSTYAFFGFNGTAGVWRLSALNEAGGWKDRTTVEDMDLAVRAGLKGWEFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVSMWKKFYVIYSFFFVRKIIAHVVTFVFYCVVLPATVLVPEVEVPKWGAVYIPSTITLLNAVGTPRSLHLLVFWILFENVMSMHRTKATVIGLMEAGRANEWVVTEKLGDALKTKSGGKASRKSRIRIGERIHLLELGVGAYLFFCGCYDLTFGKNHYFIYLFLQSIAFFIAGVGYIGVFVSNS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0691 531 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 20 525 - -
Glsi12g0691 531 FunFam Glucomannan 4-beta-mannosyltransferase 9 86 314 - -
Glsi12g0691 531 Pfam Glycosyl transferase family group 2 188 381 IPR001173 -
Glsi12g0691 531 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 364 IPR029044 -
Glsi12g0691 531 CDD CESA_CaSu_A2 95 331 - -
Glsi12g0691 531 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 312 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0691 Glsi-ChrGlsi12 23475148 23483715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0691 17 530 Miscellaneous Gene Families AT5G03760 78.447 0.0 859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0691 12 23475148 23483715 Glsi11g1070 11 6712036 6721897 CCT
Glsi12g0691 12 23475148 23483715 Glsi04g0452 04 3046663 3051357 ECH
Glsi12g0691 12 23475148 23483715 Glsi12g0691 12 23475148 23483715 ECH