Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1070 ATGCCCACTGCAGTTTTTGGGCCATTGAATGGGCCTGAAACTGAAGACGACCTGCGGAGGACAACCTTGGGATTGAAGTCTAAGGAGAGTGGAGTGTGGAGTGTGAAGGAAAATGGGTGGAAGAAGGTGCAATGTCAAGTCTTAAAAAGACATACGCACACCATATATGCACATTGGAAGGATTATGAAAGCTCTGCCACCATCCATTACCAAACCCAACTCAACTGGGGTTTCTGTAGCAGTAAACCATTTGAAGACAAAATAGATGTAGCATCCTCCCCATGTGTTCTTAAGGGCCTTGGTGTCAGTAGGTGCCCACAAACCATCTTTCGCCCCAAACACCAGCTTGTGCTTCTTTTCTGTTCTCGTCTAATTACAGAAGCTGAGAAGGTTTTGCCTTTCAGAAAAGTGCTTGGGCTATTCACGTTTCACATGGATCGGCTTTCATCCACTAATATTCTACCGGATGCATTTCAAGGGGCCAGAGATGACATTACCCTTCAACTTGGATTGATTTGGAGTCAAGTCAAAGCGCCATTGATAGTTCCGCTACTGAGAATTGCAGTCTTTCTGTGTTTGATCATGTCCTTGTTGCTGTTTATCGAGAGGATGTATATGGGCATTGTCATTACTTTGGTAAAGCTATTTGGGCGAAAACCAGAGAAGCGTTACAAATGGGAGCCAATGAAGGATGACATAGAGTTGGGGAACTCTGCTTATCCAAAGGTTCTTGTTCAAATCCCAATGTACAATGAAAGAGAGGTTTATCATCTGTCAATTGGAGCTGCATGCGGGCTCTCTTGGCCTTCAGATAGGATCATAATACAAGTTTTGGACGATTCCACTGACCCAACAATTAAGGGCTCGGTGGAGCTAGAATGCCAAAGATGGGCAAGCAAAGGTATACAAATAAAGTATGAGATTAGGGACAACAGAAATGGGTATAAAGCAGGGGCTCTCAAAGAGGGCATGAAGCGCAGCTACGTGAAAGAGTGCGATTACGTTGCCATTTTTGACGCTGATTTTCAACCAGAGCCTGATTTCCTCTGGCGCACCATCCCTTTCCTCGTGCACAATCCCGAACTCGCTCTCGTTCAGGCACGATGGAAGTTTGTGAATTCCGATGAATGTTTGATGACCAGGATGCAAGAGATGTCGCTGGATTATCATTTTACTGTGGAACAAGAAGTCGGCTCTTCCACTTACGCCTTCTTTGGGTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGGTGGAAGGATAGGACCACAGTTGAAGATATGGACCTGGCCGTGCGAGCCAGTCTCAAAGGATGGAAATTTCTATACTTGCGGAATTTAAAGGTTAAAAACGAATTGCCAAGCACTTTCAAGGCCTATCGCTACCAACAACATCGCTGGTCCTGTGGGCCAGCCAATCTTTTCAGGAAAATGGTAATGGAGATTATAAGAAACAAGAAAGTGTCTTCGTGGAAGAAGATTCATGTGATTTACAGCTTCTTCTTCGTTCGGAAGGTCATAGCCCACATCAACACTTTTGTATTTTACTGCATTGTATTACCTGCAACTGTTGTAGTGCCTGAGGTCGTCGTCCCAAAGTGGGGAGCTGTATATATCCCTTCCATCATCACCCTTCTAAATGCAGTTGGAACTCCAAGGTCGCTCCACTTACTAGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGTCTACTGGAGGCTAGAAGAGTGAATGAATGGATCGTCACTGAAAAACTTGGAGATGCTCTCAAAGCTAAAGCAGCCACTAAGACATCCAAGAAGCCACGATTTAAGATTGGAGACAGGGTTCACTTGTTAGAGCTTGGTGTTGGACTTTACCTCTTCTTCTGTGGGTGCTACGATTTTCTGTTTGGGAAAAACCACTACTTCATCTTCCTTTATATCCAATCCGTTGCCTTCTTTATTATGGCGTTTGGACATGTTGGCACCTTTGTTCCCAACTCCTAA 2034 0.4479 MPTAVFGPLNGPETEDDLRRTTLGLKSKESGVWSVKENGWKKVQCQVLKRHTHTIYAHWKDYESSATIHYQTQLNWGFCSSKPFEDKIDVASSPCVLKGLGVSRCPQTIFRPKHQLVLLFCSRLITEAEKVLPFRKVLGLFTFHMDRLSSTNILPDAFQGARDDITLQLGLIWSQVKAPLIVPLLRIAVFLCLIMSLLLFIERMYMGIVITLVKLFGRKPEKRYKWEPMKDDIELGNSAYPKVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKGSVELECQRWASKGIQIKYEIRDNRNGYKAGALKEGMKRSYVKECDYVAIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLRNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVSSWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEARRVNEWIVTEKLGDALKAKAATKTSKKPRFKIGDRVHLLELGVGLYLFFCGCYDFLFGKNHYFIFLYIQSVAFFIMAFGHVGTFVPNS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1070 677 FunFam Glucomannan 4-beta-mannosyltransferase 9 232 460 - -
Glsi11g1070 677 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 456 IPR029044 -
Glsi11g1070 677 SUPERFAMILY Nucleotide-diphospho-sugar transferases 238 519 IPR029044 -
Glsi11g1070 677 CDD CESA_CaSu_A2 241 477 - -
Glsi11g1070 677 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 166 672 - -
Glsi11g1070 677 Pfam Glycosyl transferase family group 2 334 533 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1070 Glsi-ChrGlsi11 6712036 6721897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1070 145 676 Miscellaneous Gene Families AT5G03760 80.488 0.0 932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0691 12 23475148 23483715 Glsi11g1070 11 6712036 6721897 CCT
Glsi11g1070 11 6712036 6721897 Glsi04g0452 04 3046663 3051357 ECH
Glsi11g1070 11 6712036 6721897 Glsi11g1070 11 6712036 6721897 ECH