Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0452 ATGGAGGAAGCCCAGCCCAAAATTTTTATACCAGAGTCAATCCAGGGGGTGAGTTACGACATCTCTGGACAGATTAAGCTGATATGGGATGTGTTGAAAGCGCCATTATTAGTGCCTCTGCTTAATCTTGGAGTGTACATTTGCTTAGCAATGTCACTCATGCTCTTCATTGAAAGGCTTTACATGGGTGTCGTCATCATCCTCGTCAGGCTTTTCTGGAAAAAACCAGAACAGCGTTACAGGTATGAACCCATCCAAGATGATGTTGAATTGGGCAGCTCAAACTTTCCTCCGGTTCTCGTGCAAATCCCAATGTTCAATGAAAAAGAGGTTTACAAGGTCTCCATAGGAGCAGCTTGTGGACTTTCATGGCCTGCGGACCGTCTCGTGATCCAAGTCCTCGATGATTCTACTGATCCCACCATCAAGCAAATGGTAGAGCAAGAGTGCCTGAGATGGGCTGGCAAAGGAATTAACATAACGTACCAAATAAGAGAAAACAGAACTGGGTACAAAGCCGGTGCACTCAAAGAAGGGCTCAAACGAAGCTATGTGAAACACTGCGAGTACGTGGCCATTTTCGACGCGGATTTCCGGCCAGAGCCTGACTTTCTCAGGCGAGCCATTCCCTTCTTGGAAGGCAACCCTGAGATTGCTCTGGTTCAAGCTCGCTGGAGATTTGTGAATGCGGATGAGTGTTTATTGACAAGAATGCAAGAGATGTCTTTGGATTACCATTTCACCGTGGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGTTTCAATGGCACGGCAGGTATTTGGAGAATTGCTGCAATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACAGTGGAGGACATGGATCTTGCTGTTCGTGCTAGCCTTAGGGGCTGGAAATTTTTGTACCTTGGAGACCTCCAGGCGAAAAGTGAGCTTCCCAGTACCTTAAGAGCCTTCCGCTTCCAGCAGCATCGATGGTCATGTGGTCCTGCTAATCTGTTCCGTAAAATGGTGATGGAGATAGCAAGGAACAAGAAAGTCAAATTTTGGAAGAAAGTTTATGTTATTTACAGCTTCTTCTTTGTGCGTAAAATCATAGCCCACATGATCACCTTCTTCTTCTACTGTGTGGTGCTTCCCCTGACAATTCTAGTCCCTGAGGTTCAAGTCCCAATATGGGGAGCTGTGTACATACCTTCCATCATCACCATCCTCAACTCAGTGGGAACTCCAAGGTCCGTTCACCTATTGTTCTACTGGATCCTTTTTGAGAATGTGATGTCACTGCATCGTACCAAGGCAACCTTGATAGGTCTGCTAGAAGCTGGAAGAGCCAATGAATGGGTTGTCACCGAGAAACTTGGAGACTCTGTGAATAACAAGAACAAAGCAGATGCTGCCAAGAACAACACAAACGTCACCAAAGCAATAAAAAAACCTCGATTCAAAATTGGCGAAAGGCTTCATTTATTAGAGCTGGGATTTGCAGCCTTCCTTTTCTTTTGTGGATGCTATGATTTTGTGCATGGGAAGAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCAATTGTTGGATTTGGCTATGTTGGCACCATCGTTTAA 1623 0.4541 MEEAQPKIFIPESIQGVSYDISGQIKLIWDVLKAPLLVPLLNLGVYICLAMSLMLFIERLYMGVVIILVRLFWKKPEQRYRYEPIQDDVELGSSNFPPVLVQIPMFNEKEVYKVSIGAACGLSWPADRLVIQVLDDSTDPTIKQMVEQECLRWAGKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLEGNPEIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIARNKKVKFWKKVYVIYSFFFVRKIIAHMITFFFYCVVLPLTILVPEVQVPIWGAVYIPSIITILNSVGTPRSVHLLFYWILFENVMSLHRTKATLIGLLEAGRANEWVVTEKLGDSVNNKNKADAAKNNTNVTKAIKKPRFKIGERLHLLELGFAAFLFFCGCYDFVHGKNNYFVYLFLQTITFSIVGFGYVGTIV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0452 540 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Glsi04g0452 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 378 IPR029044 -
Glsi04g0452 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Glsi04g0452 540 Pfam Glycosyl transferase family group 2 190 387 IPR001173 -
Glsi04g0452 540 CDD CESA_CaSu_A2 97 333 - -
Glsi04g0452 540 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 18 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0452 Glsi-ChrGlsi04 3046663 3051357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0452 1 540 Miscellaneous Gene Families AT5G22740 81.181 0.0 918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0452 04 3046663 3051357 Glsi04g0452 04 3046663 3051357 ECH
Glsi12g0691 12 23475148 23483715 Glsi04g0452 04 3046663 3051357 ECH
Glsi11g1070 11 6712036 6721897 Glsi04g0452 04 3046663 3051357 ECH