Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2284 ATGGGCACTGGAGCCCAACATTCAATTCCCACCTCCAATTCTCTTCTTCCCTTCTTCTCACTTCCATTTCCATTCCTCACCCTTCTTCCCTCGTTGCATCATAGCCATTTTCATATCAATCACAATATTCAAATGGGTTCTTTCCCTCCCCATTATTATTTCTCTACACGCATTGCATTCATCTGGGTTCTTCTTTGCATAGATAAATGTGCATTAGGGGCAATGTTCACTATAATCAACAAGTGTGATTACACGGTGTGGCCAGGGATTCTTGCCAATGCAGGAAGCTCCGGGTTGGATAGCACCGGGTTCGAGCTTCGACCAGGTGGGTCCCGGAGCTTCCAAACCCCACCCAACTGGTCCGGGAGATTCTGGGGTAGAACCGGGTGCAATTTTGACCTGAATACCCAACAGGGTAGTTGCACAACAGGGGATTGTGGCTCCAACCAGGTGCAGTGTAATGGTGGCGGGGCAAGCCCACCTGCAACACTCGCAGAGTTCACAATCCGGTCGGGTTCCCAGGACTATTATGACGTGAGCCTTGTTGACGGGTACAATTTACCGATGATGGTCGATGCGAGAGGCGGGTCTGGCGCATGCGCGTCAACCGGGTGCGTGGCGGAACTCAACCAGCGGTGCCCGAACGAGTTACGGGTCGGGAATCGGGTCGCGTGCAAGAGCGCGTGCGAGGCGTTCCAGAGCCCCGAATACTGCTGCAGCGGCGCGTACGCTTCACCCGCGACTTGTAAGCCTTCGGTTTACTCGCAGGTTTTCAAAAGCGCGTGCCCCAAATCGTATAGCTACGCCTACGACGACGCTACGAGTACCTTTACGTGTACGGGAGCAGATTATACTATTACATTCTGCCCTTCAACCACAAGCCAAAAATCCGCAAGAGGTTCACCGCCACCTCCTCCTGCAGTTGGGTCTGAAACAGGAACAGGGGACATGCCAACAATAGCTGACAATTCATGGTTTTCCGACTTCTTTGCTGGATTCTCACCCAAGTCTTACTCTTGCCCAACCTCACTTATTACTACTATGACTATGCTAATATTTCTCTATTTGCAATACTCATAG 1080 0.5139 MGTGAQHSIPTSNSLLPFFSLPFPFLTLLPSLHHSHFHINHNIQMGSFPPHYYFSTRIAFIWVLLCIDKCALGAMFTIINKCDYTVWPGILANAGSSGLDSTGFELRPGGSRSFQTPPNWSGRFWGRTGCNFDLNTQQGSCTTGDCGSNQVQCNGGGASPPATLAEFTIRSGSQDYYDVSLVDGYNLPMMVDARGGSGACASTGCVAELNQRCPNELRVGNRVACKSACEAFQSPEYCCSGAYASPATCKPSVYSQVFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSTTSQKSARGSPPPPPAVGSETGTGDMPTIADNSWFSDFFAGFSPKSYSCPTSLITTMTMLIFLYLQYS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2284 359 ProSiteProfiles Thaumatin family profile. 73 290 IPR001938 -
Dod08g2284 359 Pfam Thaumatin family 80 290 IPR001938 -
Dod08g2284 359 MobiDBLite consensus disorder prediction 293 314 - -
Dod08g2284 359 Gene3D Thaumatin 74 290 IPR037176 -
Dod08g2284 359 SMART tha2 76 290 IPR001938 -
Dod08g2284 359 PANTHER OS03G0233200 PROTEIN 60 303 IPR001938 -
Dod08g2284 359 SUPERFAMILY Osmotin, thaumatin-like protein 74 291 IPR037176 -
Dod08g2284 359 PANTHER THAUMATIN-LIKE PROTEIN 1 60 303 - -
Dod08g2284 359 PRINTS Pathogenesis-related protein signature 75 87 IPR001938 -
Dod08g2284 359 PRINTS Pathogenesis-related protein signature 280 289 IPR001938 -
Dod08g2284 359 PRINTS Pathogenesis-related protein signature 175 191 IPR001938 -
Dod08g2284 359 PRINTS Pathogenesis-related protein signature 123 134 IPR001938 -
Dod08g2284 359 CDD TLP-PA 76 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2284 Dod-Chr8 50883126 50887270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2284 54 297 Receptor kinase-like Gene Family AT5G38280 47.638 5.52e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2284 - - gmx:100786772 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2284 08 50883126 50887270 Dod02g0447 02 5898130 5900860 ECH
Dod08g2284 08 50883126 50887270 Dod08g2284 08 50883126 50887270 ECH
Dod02g0446 02 5886652 5888985 Dod08g2284 08 50883126 50887270 ECH