Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0447 ATGGCTGCCACTTTGTTCATCCTATTCTTCTGCCAATTGCTAAAGGGTTCGTATTCAACAACATTCACAATAGTAAACAAGTGCAGCTACACAGTATGGCCGGGCATTCTATCCGGAGCCGGAACCTCGCCGCTCTCCACTACTGGATTTGCTCTCCAGTCCGGCGAGTCCAGCGCCCTCGCGGTCCCCGCCGGCTGGTCCGGCCGCCTATGGGGCCGCACTCTCTGCACCCAGGACGCCACCACTGGAAAATTCTCATGCGTCACAGGAGACTGCGGCTCCTCCACAGTCGAATGCTCCGGCAGCGGCGCCGCCCCTCCCGCCACGCTAGCCGAGTTCACCCTGAACGGCGCCGACGGGCTCGACTTCTTCGACGTCAGCCTCGTCGACGGCTACAACCTCCCCATGACGGTGGAGCCTCAGGGCGGGACCCCCGGCGCCGGGAACTGCTCGGCAACCGGGTGCGTGGTGGACTTAAACTCTGCGTGCCCGACGGAGTTGAGGGTGATGAGCAGCAACGGCGGCGATGGAGAGGGCGTGGCGTGCAAGAGCGCGTGCGAGGCGTTTGGTGATCCGCAGTATTGCTGTAGTGGAGCTTACGCTTCTCCTGACACATGCAAGCCCAGCTCCTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCCTATAGCTACGCCTATGACGATGGAACAAGCACCTTCACCTGTGCTTCGGCTGATTACCTTCTCACTTTCTGCCCCACGCCATCAACTAGTTCGATCAAGTCGGGGAATGGGAAATACCCCGTGGCGATGCAAGTATCAGGAGCTTATCATGTGGACGGGTCAACCAACAACGGGATGAAGGTGGCTATTGCTGCCCATGTTTTGATGGCGTTTTGGCGTTGGTGGCATTAG 897 0.5953 MAATLFILFFCQLLKGSYSTTFTIVNKCSYTVWPGILSGAGTSPLSTTGFALQSGESSALAVPAGWSGRLWGRTLCTQDATTGKFSCVTGDCGSSTVECSGSGAAPPATLAEFTLNGADGLDFFDVSLVDGYNLPMTVEPQGGTPGAGNCSATGCVVDLNSACPTELRVMSSNGGDGEGVACKSACEAFGDPQYCCSGAYASPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYLLTFCPTPSTSSIKSGNGKYPVAMQVSGAYHVDGSTNNGMKVAIAAHVLMAFWRWWH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0447 298 ProSiteProfiles Thaumatin family profile. 19 247 IPR001938 -
Dod02g0447 298 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Dod02g0447 298 PRINTS Pathogenesis-related protein signature 69 80 IPR001938 -
Dod02g0447 298 PRINTS Pathogenesis-related protein signature 21 33 IPR001938 -
Dod02g0447 298 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Dod02g0447 298 SMART tha2 22 247 IPR001938 -
Dod02g0447 298 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 4 266 - -
Dod02g0447 298 Pfam Thaumatin family 26 247 IPR001938 -
Dod02g0447 298 CDD TLP-PA 21 246 - -
Dod02g0447 298 Gene3D Thaumatin 20 247 IPR037176 -
Dod02g0447 298 PIRSF PR5 1 289 IPR001938 -
Dod02g0447 298 PANTHER OS03G0233200 PROTEIN 4 266 IPR001938 -
Dod02g0447 298 SUPERFAMILY Osmotin, thaumatin-like protein 20 247 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0447 Dod-Chr2 5898130 5900860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0447 3 252 Receptor kinase-like Gene Family AT5G38280 51.793 7.12e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0447 - - gmx:100806478 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0447 02 5898130 5900860 Dod02g0447 02 5898130 5900860 ECH
Dod08g2284 08 50883126 50887270 Dod02g0447 02 5898130 5900860 ECH
Dod08g2283 08 50858579 50862538 Dod02g0447 02 5898130 5900860 ECH