Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1691 ATGGCCGAGAGTGCCTTAATAGTGGCCAATCATTCTTCTTCTTCTTCTTCTTCTTCCCCTCCTTGCAAGCACATTCCTCCACGATCACCGTCCATGCTATTTTCTTCACTTATCAACGATGGCATTTTCTCCAACAAGAAAGGCTCCCTATACAGCAAGCTTCGTTCCGAACCCCTCAGGCTCTCCGTCCTTAAATTGGATGGCTCTACTTTCGATATTCAAGTTGCTAAGACGGCAACTATTGCTGAACTTAAGGACGCAGTGGAGGCAGTCTTTAGTCACATGCCTGAGAAGGGACCAGGGAAGATTTCATGGCCACATGTTTGGGGGCAGTTTTGCTTATGCCATGATGGACAGAAGCTAGTCACAGGTGATGATTATCTTAGAAATTATGGCATCAAGGACGGTGACCAGCTTCGATTCATCCGCCATGTCTCAAACGGTTGCAGTCTTCAAAGAATGCGGTTGAAGAAATGCATTGTCCATTTCAAACAACACAGGAGATCATCATCCCAAGTGAATTGCTACCAACCTAAAGAACATAGTGATGACGACGACGATGAAATTGGTTCTGATGATGTAGCCATTGAAAATGGGAAGATTCAGCACCGCAATGAAGAAGACAATCATGTCGGAAAGAACAAGTTAACTGGCTTTGTGGGAGAGTTGTTCTCATACAACCGGCTGGCTGTTGTGGGAAAAACTCGAACTAAAAGCAGGATTTTCTGCCCATCAACGGTTGCAAGATGTTTACTGGGCAAATTTAGAAAGATAAGAAGGATTTTATGCTTTGGCAGGAGGCGGCGATATCCTTGGTGA 819 0.4481 MAESALIVANHSSSSSSSSPPCKHIPPRSPSMLFSSLINDGIFSNKKGSLYSKLRSEPLRLSVLKLDGSTFDIQVAKTATIAELKDAVEAVFSHMPEKGPGKISWPHVWGQFCLCHDGQKLVTGDDYLRNYGIKDGDQLRFIRHVSNGCSLQRMRLKKCIVHFKQHRRSSSQVNCYQPKEHSDDDDDEIGSDDVAIENGKIQHRNEEDNHVGKNKLTGFVGELFSYNRLAVVGKTRTKSRIFCPSTVARCLLGKFRKIRRILCFGRRRRYPW* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1691 272 ProSiteProfiles Ubiquitin domain profile. 59 148 IPR000626 GO:0005515
Dod08g1691 272 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 33 271 IPR039690 GO:0000398|GO:0005689
Dod08g1691 272 SUPERFAMILY Ubiquitin-like 56 149 IPR029071 -
Dod08g1691 272 CDD Ubl_SNRNP25 59 144 IPR040610 -
Dod08g1691 272 Pfam Ubiquitin-like domain 59 145 IPR040610 -
Dod08g1691 272 Gene3D - 53 151 - -
Dod08g1691 272 PANTHER - 33 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1691 Dod-Chr8 40298244 40302157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1691 - - ahf:112697496 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1691 08 40298244 40302157 Dod08g1691 08 40298244 40302157 ECH
Dod08g1691 08 40298244 40302157 Dod09g0897 09 28679265 28683241 ECH
Dod08g1691 08 40298244 40302157 Dod09g0890 09 28585329 28592245 PCT