Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0897 ATGGAAGAGAGCATGTCGACGATGGAGCACGACGATTTCCCCTCTCGGGATGCACCTTCTTCACCTTTGCGATCTCTGAGCGCGCACTTCTCTTCGCTGATGATCAACGTCGGTCACAAACGCAGCATCGTTTCCACCAGAAGGAGCTTTTCCTACAACAGGCTTCCGTCCCAACCGTTCAGGTTCTCCGTCCTCAAATTGGACGGATCTTGCTTCCATGTTGAAGTTTCGAAGACGGCAACTGTTGCGGAACTCAAGCAGGCTGTGGAGGCAGTTTTTAGTCACTTGCCTCAGAAAGGGCTAGGGAAAATATCATGGGCACATGTTTGGGGGCAGTTCTGCTTATGCTATGAAGGACAGAAGCTTGTTACTGATACTGATTATCTCAGAGATTGTGGCATCAAGGATGGTGGCCAGCTTCGTTTCATACGCCATGTATCTAACACTTGCAGTTTTCAAAAAAAGAGGATGAAGAAAAGAGTTGTCAGATCGAAACAATACAGGAGGTCACCATCACTGGTGAATAGATATAAACAGAAAGAACATTGTGGAGATGATTTCATTGGTTTGGATGATATAGTCATAGAGAATGGAAAGATCCAGCGTTACAATGAAAAAGAAGATCGTGTTGGCAGGAGCAGATTAACTGGATTTTTGGGAGGTTTGCTCTCGTACACCCGGCTGGCAGTTGTGAGACAAGCTAGAGCTGAAAGCAGGATTTGCGCCTCAACTATTGCCAAAGTGAAGGGAGGCATTGGCAGTGGCACCGACGGAAGCCTATGGTTTGCCCTAGGTCGATTCGCCCTCCCAACTACTAGTATTTCAACGTCACAACAAGTCAACAACCATTAA 852 0.4683 MEESMSTMEHDDFPSRDAPSSPLRSLSAHFSSLMINVGHKRSIVSTRRSFSYNRLPSQPFRFSVLKLDGSCFHVEVSKTATVAELKQAVEAVFSHLPQKGLGKISWAHVWGQFCLCYEGQKLVTDTDYLRDCGIKDGGQLRFIRHVSNTCSFQKKRMKKRVVRSKQYRRSPSLVNRYKQKEHCGDDFIGLDDIVIENGKIQRYNEKEDRVGRSRLTGFLGGLLSYTRLAVVRQARAESRICASTIAKVKGGIGSGTDGSLWFALGRFALPTTSISTSQQVNNH* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0897 283 Gene3D - 55 153 - -
Dod09g0897 283 MobiDBLite consensus disorder prediction 1 20 - -
Dod09g0897 283 CDD Ubl_SNRNP25 60 145 IPR040610 -
Dod09g0897 283 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 43 248 IPR039690 GO:0000398|GO:0005689
Dod09g0897 283 PANTHER - 43 248 - -
Dod09g0897 283 MobiDBLite consensus disorder prediction 1 17 - -
Dod09g0897 283 Pfam Ubiquitin-like domain 61 146 IPR040610 -
Dod09g0897 283 SUPERFAMILY Ubiquitin-like 56 148 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0897 Dod-Chr9 28679265 28683241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0897 - - gmx:100820296 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0897 09 28679265 28683241 Dod09g0897 09 28679265 28683241 ECH
Dod08g1691 08 40298244 40302157 Dod09g0897 09 28679265 28683241 ECH