Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0290 ATGAGAACAGGAAGTTGTGCTGTGCAACAAGGGCTAACCCCAGAGGCTGCAAGCATAGTGAAGCAAGCAGTGACACTTGCAAAGCGCCGTGGCCATGCTCAAGTGACACCACTTCATGTTGCAAACACCATGCTTTCAGTGACCCATGGCCTGTTGAGAAATGCTTGTCTCCAATCCCATGCTCACCCTCTTCAGTGCAAGGCCTTGGAGCTTTGCTTCAACGTTGCACTGAACCGGTTACCAGCTTCGACTTCAGGCCCCATGTTGGGGACTCATCATCACCACACTCAGTGTCCTTCAATTTCAAACGCTTTAGTTGCTGCTTTCAAGCGTGCTCAGGCTCACCAGCGCCGTGGATCCATTGAGAATCAGCAACAGCCATTGTTGGCAGTGAAGATTGAGCTTGAGCAGCTCATAATATCAATCTTGGATGACCCTAGTGTTAGTAGGGTCATGAGAGAGGCAGGGTTCTCTAGCACACAAGTGAAGAGCAATGTGGAACAAGCTGTATCTTTGGAAATATGCTCAAAGAGTAATAGCCCTTCTTCTGTGAGTGGCAACAAGTCAAAGGAGAACAATAATCCAAGTACCCTCTCTCATCATCATCAAGGTGATGAAGACAGCAATAATAACAACAACAAGCCCAACAAAGCATTGGTGTTGGATCCTGCTAGGGATGAGGATATTTCTAGTGTGATAGATAATTTGGTGAGTCAAAGGAGGAGGAGCACAGTGATTGTTGGTGAGTGTGTTGCTAGCCTAGAGGGTGTAGTTAGAGGAGTGATGGATAAGGTTGAAAAGGGAGATGTTGGTGAAGGTCTTAGAGGTGTCAAGTTTGTGCCTCTTTCTCTTTCTTCTTTTGTCCATGTTTCTAGAGAGGAGGTTGAGCAAAAGGTTGAAGAGATTAGGAGCCTTGCAAAGATGAGTTCTCATGGTAAAGGGTGTGTTTTGTATCTTGGAGATCTTAAATGGGTGTTTGATTATAGGACCCGTTATTCTAGCCAAGGGAGGGTTTGTTATTGTCCTGTGGATCACATGATAATGGAGATTGCAAAGCTGGTGAGTGGGGTTGGAGACAATAATAATGGAAGACTTTGGATGATGGGTATTGCCACTTTCCAAGCTTACATGAGATGCAAAAATGGCCAGCCATCATTGGAGAGTCTTTGGGGTCTTCATCCCATTACCATCCCTGCAGGAAGCTTGCGCTTGAGTCTCATCACTGACAGTGGTCTACAAAATCAGCCCACCAACACGAAAGCTGACGATAGAACTAGCTGGCTATTACTAGAAGGAGTAGGAGGTGATAATAATCATCATGATAAGAAGAAGAAGCAACCATCTTGCTTCGCGGAACCTTCGGCTGATATCGAAGTTCGAAGCTTGCAGAGCAGTACTTGTAACAGTGATTCCTCGAGTTCTAGCCTTCCTGGATGGCTCCAACAGTACAAAAATGAGAATAGAGGAGTCACCTCTAATGATCAGGACTGTGTCCTGGTGGGAGAGCTCTGCAAAAAGTGGAACTCTATGTGCAGTTCAAAGCAAAAACAACCCTACCCTTCTGAGAAAACCCTGACATTATCACCTTCTTCATCTACTTCTGGCTTCTCCTATGAGCAGCTAAATCCTAGCGGGCACAAGAGCCACCGTTTCTGGATCTCTGAAGGTGGTAGCAAGCCCAATGAGCCCACTTTGAGAGTGTACATCTCAGAGAGCAACGAGTACACTACTAATAAGCATCCATTAGTCTCATCATCAAATCCAAGTTCCAAGCTTAATTCCACTTGTTGTAGTGACATCATGGAAATGGAGCACGTGAGCAAGTTCAAAGAGCTCAACTTGGAGAACCTTAAAACCCTTTGCAATGAGTTGGAGAAAAAAGTGCCATGGCAGAAAGATGTAATACCTGAAATAGTAAGCACTCTTTTGCAATGCCGTTCTGGAATGCTCAGAAGGAAAGGGAATAATGTGAGAAGCAGTGATGTGAAAGAAGAAACATGGTTGTTCTTCCAAGGTGTTGATGTTGAAGCCAAAGAGACAATAGCAAGAGAATTGGCTAGGCTTGTTTTTGGGTCCCAAAACAACCTCATCTCAATATCACTTAGCAGTTTTGCATCAACAAGGGCAGATTCAACTGAGGATTGTTGCAGGAACAAGAGATCAAGAGAAGAACCAAGTTGCAGTTACATTGAGCGATTCGCTGAAGCAGTGTCTTGTAACCCTCATAGGGTGTTCCTTGTTGAGGACATTGAACAAGCTGATTATTGCTCTCAACTTGGTTTCAAAAGGGCTATCGAAAGAGGAAGAGTTGAAGATTCATATGGTGAAGAATTTGGACTTTGTGATGCTATCATCATTCTTAGCTGTGAAAGTTTTAGTTCAAGGTCAAGGGCTTGCTCTCCTTTGGCCAAGCAAAACTCTTGTGAAAGTTCAAGAGAAGAGAATAATGAGGATGATGTTGTTGCTACTTTGGAGAAGACAATTAGCCCTTGTGTTTCTTTGGATTTGAATATTTCCATTGGGGATGAGTGTGATGACGAGGACGGGTCATCAGTGGATGAAATTGGACTTCTTGAATCTGTTGACAGAAAGATTATCTTCAAAATTCAGGAATTATGA 2619 0.4399 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSVTHGLLRNACLQSHAHPLQCKALELCFNVALNRLPASTSGPMLGTHHHHTQCPSISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSLEICSKSNSPSSVSGNKSKENNNPSTLSHHHQGDEDSNNNNNKPNKALVLDPARDEDISSVIDNLVSQRRRSTVIVGECVASLEGVVRGVMDKVEKGDVGEGLRGVKFVPLSLSSFVHVSREEVEQKVEEIRSLAKMSSHGKGCVLYLGDLKWVFDYRTRYSSQGRVCYCPVDHMIMEIAKLVSGVGDNNNGRLWMMGIATFQAYMRCKNGQPSLESLWGLHPITIPAGSLRLSLITDSGLQNQPTNTKADDRTSWLLLEGVGGDNNHHDKKKKQPSCFAEPSADIEVRSLQSSTCNSDSSSSSLPGWLQQYKNENRGVTSNDQDCVLVGELCKKWNSMCSSKQKQPYPSEKTLTLSPSSSTSGFSYEQLNPSGHKSHRFWISEGGSKPNEPTLRVYISESNEYTTNKHPLVSSSNPSSKLNSTCCSDIMEMEHVSKFKELNLENLKTLCNELEKKVPWQKDVIPEIVSTLLQCRSGMLRRKGNNVRSSDVKEETWLFFQGVDVEAKETIARELARLVFGSQNNLISISLSSFASTRADSTEDCCRNKRSREEPSCSYIERFAEAVSCNPHRVFLVEDIEQADYCSQLGFKRAIERGRVEDSYGEEFGLCDAIIILSCESFSSRSRACSPLAKQNSCESSREENNEDDVVATLEKTISPCVSLDLNISIGDECDDEDGSSVDEIGLLESVDRKIIFKIQEL* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0290 872 MobiDBLite consensus disorder prediction 177 218 - -
Dod07g0290 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 791 IPR027417 -
Dod07g0290 872 MobiDBLite consensus disorder prediction 177 199 - -
Dod07g0290 872 SUPERFAMILY Double Clp-N motif 12 166 IPR036628 -
Dod07g0290 872 Gene3D - 216 397 IPR027417 -
Dod07g0290 872 MobiDBLite consensus disorder prediction 513 539 - -
Dod07g0290 872 Gene3D - 9 171 IPR036628 -
Dod07g0290 872 ProSiteProfiles Clp repeat (R) domain profile. 8 173 IPR004176 -
Dod07g0290 872 Coils Coil 607 627 - -
Dod07g0290 872 Pfam Clp amino terminal domain, pathogenicity island component 133 170 IPR004176 -
Dod07g0290 872 Pfam Clp amino terminal domain, pathogenicity island component 23 46 IPR004176 -
Dod07g0290 872 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 871 - -
Dod07g0290 872 PANTHER PROTEIN SMAX1-LIKE 3 1 871 - -
Dod07g0290 872 Gene3D - 595 833 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0290 Dod-Chr7 3615014 3619490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0290 - - gmx:100807485 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0290 07 3615014 3619490 Dod08g1057 08 13352046 13357696 ECH
Dod07g0290 07 3615014 3619490 Dod04g0361 04 4781380 4786820 ECH
Dod07g0290 07 3615014 3619490 Dod07g0290 07 3615014 3619490 ECH
Dod07g0290 07 3615014 3619490 Dod05g0542 05 7819616 7826889 ECH