Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2283 ATGGATCAACATGCTTCATTACTATTCTCATTCTTGTTAACGCTTCATCTATCACTTTCAGGGGTAATGGCATCCACATTCACTTTGGTTAACAAATGCGACTATACCGTGTGGCCTGGAATTCTCTCAAATGCCGGGGTCTCGCCTCTTTCGACCACCGGCTTCGTCCTTAAACCGGGTGAGTCAACCCCGGTTACCGCCCCAGCTTCCTGGGGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAGACTCCACAGGAAAATTCTCCTGCGTCACCGGCGACTGCGGCTCCGGCAAGCTGGAATGCTCCGGCAACGGCGCCACGCCGCCGGCCACCCTGGCGGAGTTCACCCTCGACGGCGCCGGCGGCCTTGACTTCTTCGACGTCAGCCTCGTCGACGGCTACAACGTCCCCATGCTGGTGGTCCCCAGCGGCGGCTCCGGCGGCGGGAACTGCTCCGCCACGGGGTGCGTCGGTGATTTGAACGGCGCTTGTCCTTCGGAGCTGAAGGTTGTGAGTGAGGATGGGAAAGAAGGGGTCGCGTGTAAGAGCGCGTGCGAGGCTTTCGGTTCGCCGCAGTATTGCTGCAGTGGCGCGTATGGGACGCCGGATACATGCAAGCCTTCGAGTTACTCGCAGATTTTTAAGAGCGCTTGCCCACGCGCGTATAGCTACGCGTACGATGATAAGACGAGCACGTTTACTTGTGCTAAAGCGGATTATACCATCACCTTTTGCCCTGCTCCCAGTACCAGTCAGAAAGCGTCACAGGATGGTTCATCTTCTGCCTCGCCCTTGCTCAACAACGGGACAATGGTGTATGAAGGTTTAGACCAAAGTGAAATATCATGGGCCACGTGTAGCCATGTGTTCCAATCCCAAGCAATTGCCGGCATTGTTAGTGTCACTATGGCAATTTGGCGGTTGTGCCAGCTCTTCTAA 945 0.5661 MDQHASLLFSFLLTLHLSLSGVMASTFTLVNKCDYTVWPGILSNAGVSPLSTTGFVLKPGESTPVTAPASWGGRFWGRTLCSQDSTGKFSCVTGDCGSGKLECSGNGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPSGGSGGGNCSATGCVGDLNGACPSELKVVSEDGKEGVACKSACEAFGSPQYCCSGAYGTPDTCKPSSYSQIFKSACPRAYSYAYDDKTSTFTCAKADYTITFCPAPSTSQKASQDGSSSASPLLNNGTMVYEGLDQSEISWATCSHVFQSQAIAGIVSVTMAIWRLCQLF* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2283 314 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
Dod08g2283 314 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Dod08g2283 314 Gene3D Thaumatin 25 248 IPR037176 -
Dod08g2283 314 CDD TLP-PA 26 247 - -
Dod08g2283 314 PANTHER OS03G0233200 PROTEIN 11 273 IPR001938 -
Dod08g2283 314 PIRSF PR5 1 286 IPR001938 -
Dod08g2283 314 PANTHER BNAA02G17480D PROTEIN 11 273 - -
Dod08g2283 314 Pfam Thaumatin family 31 248 IPR001938 -
Dod08g2283 314 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Dod08g2283 314 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Dod08g2283 314 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Dod08g2283 314 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Dod08g2283 314 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Dod08g2283 314 SMART tha2 27 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2283 Dod-Chr8 50858579 50862538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2283 1 248 Receptor kinase-like Gene Family AT5G38280 55.600 2.03e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2283 - - gmx:100787631 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2283 08 50858579 50862538 Dod02g0447 02 5898130 5900860 ECH
Dod08g2283 08 50858579 50862538 Dod08g2283 08 50858579 50862538 ECH