Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0236 ATGGAGTCTTTTCCGCAAAACCAGTCATTTTACCTTCACCTTCGATTGACAATTGGATTTTATGTGGTGGTTGCAGATTTAGCAGAGCTGGAAAAGATGAACACCAGAGCCAGGACTAAGCTGCACCCTATGAAAGCTCCAATCCCAAATGGAAAAATTGATAAGCTGAAGAAGAAGCTTAGGCATGAAGAGAACATCCACAGAGCATTGGAAAGGGCTTTCAACAGACCTATGGGGGCTCTGCCTCGTCTTCCTCCGTATCTTCCCCCCTATATACTGGGGCTTTTGGCTGAAGTAGCAGTCCTGGAAGAGGAAATTGTAAGGCTTGAAGAGCAGGTAGTGCATTTCAGGCTGGACTTGTACCAGGAAGCCGTCTACTTGTCATCCTCTAAGAGAAGAATGGAGCACTCAGCTGATGTAAACAGTGCAAATTCATTCGACAGTCCGAGACCGGTTAAATTGAAGTCTCTTTCCCAGACAGCGGATAATCCAGCAACATCTACCACTAGACCTACAACAACATTCCCAGAGGATGGGCAAGGAAAAGAGAATCAATCCTGTACCAATTCTTTTAAGAGCAGCAAGCAGTTTTCATGTAAAGGCCAAACAACTAAAACTACAATCAAGAAACTTTCAACTGACAATAAGTCAGTGCAGAAACGTGGGGATCCTTCAAAGAGGCAGCAAGAATTAAGGGTAAACGACAAATTAATTGCAGAAGTAAGGAACCATTGTCCGCATGAAAGACTACCGGGAGATGACAGCCCTAATATTATTTCTGAAAATATTTTGAAGTGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGCATCCAGGTCCTGCAGATGACGTAGCATCCTTATCAGCTCTGAAAAATCGAAACTGTGTTGAAGGAACAGAGATTAGAGATCCTTATGGTATCTGTTTGGGATTTGGAAAGCAGGATATTGGTCCATACAATCAACTATGTGCCATTGAACTCAAATCTTTCAATCCAAAACGAACAGCGAATTCTTTGATTTTACTGCGTAGATTAAAAATTCTTTTCGGGAAACTTGCCTCTGTCAATTTGGAGAACCTTAACCACCAGGAGAAACTTGCATTCTGGATCAACATATATAACGCCTGTCTGATGAATGCACTCATAGAGAATGGCATTCCCGAGAGTCCTGAAATGGTTGTTTCACGGATGCGAAAGGCAACAATAAACGTTGGTGGACACCTGCTGAGTGCAAACACCATCGAACATTTCATCCTAAGACTTCCTTACCACTGGAAATTTGGAGCAAAGAATCATGAAATGACAGCAAGAAGCATATTTAGACTCGAATTGTCAGAACCTCTAGTGACATTTGCACTCTCCCGTGGAACTTGGTCCTCTCCTGCTGTGAGAGTTTACAAGGCATCCCAAGTCGAGAACCAGCTGGACGTAGCAAAAAGGGAGTACTTACAGGCTGCAATTGGAATTTCAACGTCCAAGTTTGCTATCCCAAAGCTGCTGGATTGGTATTTACTGGATTTTGCAAAAGACTTAGAATCATTACTGGATTGGATCTGCCTACAGTTACCAAGTGAACTAGGGAAAGAAGCCATTGAGTTCCTTGAGAAAAGAAAAACCCAGCCCCTCTCACAATTTGTACAAATTATACCATATGACTTCAGTTTTAGATACCTTTTATGTACATAA 1692 0.422 MESFPQNQSFYLHLRLTIGFYVVVADLAELEKMNTRARTKLHPMKAPIPNGKIDKLKKKLRHEENIHRALERAFNRPMGALPRLPPYLPPYILGLLAEVAVLEEEIVRLEEQVVHFRLDLYQEAVYLSSSKRRMEHSADVNSANSFDSPRPVKLKSLSQTADNPATSTTRPTTTFPEDGQGKENQSCTNSFKSSKQFSCKGQTTKTTIKKLSTDNKSVQKRGDPSKRQQELRVNDKLIAEVRNHCPHERLPGDDSPNIISENILKCLSTILMRMSSVKHPGPADDVASLSALKNRNCVEGTEIRDPYGICLGFGKQDIGPYNQLCAIELKSFNPKRTANSLILLRRLKILFGKLASVNLENLNHQEKLAFWINIYNACLMNALIENGIPESPEMVVSRMRKATINVGGHLLSANTIEHFILRLPYHWKFGAKNHEMTARSIFRLELSEPLVTFALSRGTWSSPAVRVYKASQVENQLDVAKREYLQAAIGISTSKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAIEFLEKRKTQPLSQFVQIIPYDFSFRYLLCT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0236 563 MobiDBLite consensus disorder prediction 214 230 - -
Dere04g0236 563 Coils Coil 92 119 - -
Dere04g0236 563 Coils Coil 53 73 - -
Dere04g0236 563 MobiDBLite consensus disorder prediction 210 230 - -
Dere04g0236 563 Pfam Protein of unknown function, DUF547 360 485 IPR006869 -
Dere04g0236 563 MobiDBLite consensus disorder prediction 156 194 - -
Dere04g0236 563 Pfam Leucine-zipper of ternary complex factor MIP1 52 123 IPR025757 -
Dere04g0236 563 PANTHER EXPRESSED PROTEIN 52 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0236 Dere-ChrDere04 2421030 2424879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2614 05 37010605 37013785 Dere04g0236 04 2421030 2424879 CCT
Dere04g0236 04 2421030 2424879 Dere13g0594 13 7365766 7371268 CCT
Dere04g0236 04 2421030 2424879 Dere04g0236 04 2421030 2424879 ECH