Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2614 ATGACACATGAAAAAGCCGAGATGCAGGGAAGCTTGCGTGAGGGCACCTCAAGAGCAGCTAAAGATGGAAAAGCATCGAGCAGAGATAGAAAATTGGCTTTGCAACAGGATGTTGATAAGTTGAAGAAGAAGCTCAGGCATGAAGAGAATATCCACAGGGCATTGGAGAGGGCTTTGAACAGGCCTCTGGGAGCTCTGCCTCGTCTTCCTCCTTATCTCCCTCCCCGTATAGTAGCACTGCTGGCGGAAGTCGCAGTTCTGGAAGAAGAAATTGTAAAGCTTGAAGAACAGATCGTGGATTTGAGGCAGGACTTGTACGAGGAAGCTGTGTACATGTCATCTTCTAGAAAGAGAATGGAGCATTCAGCTCAATTCAACAATGCAAATCCAATTGACAGTCCCAAACTCGATAAATTAAAGTCTTCTCCCCAAAAAGTAACATCTGCAATGAATTCTGCTACAACGCTCCCGGAGGATAAACAAGGGAAAGAGAATGAATCCTGTACTAATTCTTCCAAGAGCAGCAAGCAATCCACATGTACAAGCCCAACGATCAAAACCCCAATTAAGAAAAATCCCATTGACAATAAATCAGTGCAGAAACGTAGGGGTCCTCCAAAGAGGCAGCCAGAAACAAGGGTGAACGACCAGCCAATTGCTGAAGTAAGAAATCCAAGTGCACATAAAAAACTACCAGGAGATGAAAGCCCGAATATAGTATCCGAAAATATTGTTAAGTGCTTATCAAGCATTCTCTTGAGAATGAGTTCAGCGAAGAATATTGTTCTTGCAGATGGCTCACCGTCCCTTAGGGCTCTGAAAACTCGAAATGTTGAAGGAACAGAATTTTGGGATCCTTATGGCATCTGTTCTGAATTTGGAAAGAGGGATATTGGTCCTTACAAGCAATTATGTGCAATTGATGCTAAATCTTTCAATCCAAAAAGAACAGCAAATTCTCTCTTTTTACTGTCACGGTTAAAACTTCTTCTTCGGAAACTTGCCTCTGTCAGCTTAGAGAACCTCAACCATCAGGAGAAGCTCGCTTTCTGGATCAACATTTATAATTCTTGCATGATGAATGCATTCATAGAGAATGGCATCCCGGAGAATCCTGAAATGGTTGTCGCGCTGATGCGGAAGGCAACAATAACTGTAGGTGGATACTTGCTAAGTGCGACCACCATAGAACATTGCATCCTAAGGCTTCCTTATCACTGGAAATTGACATTTTCCCAGGGAGCGAAGAATCATGAAATGTCAACAAGAAGCATATTTGGATTGGAATTGTCAGAACCCCTTGTCACATTTGCGCTCTCCTGTGGAACTTGGTCTTCCCCAGCTGTGAGAGTTTACTCGGCATCCCAGGTTGAGAACGAACTGGAAATGGCAAAAAGAGAGTATTTACAGGCAGCAGTTGGAATTTCGACATCCAAGTTTGCAATCCCAAAACTGTTTAACTGGTATTTACTGGACTTTGCAAAAGACTTAGAGTCATTGCTGGATTGGATCTGCCTCCAGTTACCAAGTGAACTAGGGAAAGAAGCCATTAATTTCCTTGAGAAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATTATGCCTTATGAGTTCAGTTTTAGATACTTGCTATGCACATAA 1644 0.4258 MTHEKAEMQGSLREGTSRAAKDGKASSRDRKLALQQDVDKLKKKLRHEENIHRALERALNRPLGALPRLPPYLPPRIVALLAEVAVLEEEIVKLEEQIVDLRQDLYEEAVYMSSSRKRMEHSAQFNNANPIDSPKLDKLKSSPQKVTSAMNSATTLPEDKQGKENESCTNSSKSSKQSTCTSPTIKTPIKKNPIDNKSVQKRRGPPKRQPETRVNDQPIAEVRNPSAHKKLPGDESPNIVSENIVKCLSSILLRMSSAKNIVLADGSPSLRALKTRNVEGTEFWDPYGICSEFGKRDIGPYKQLCAIDAKSFNPKRTANSLFLLSRLKLLLRKLASVSLENLNHQEKLAFWINIYNSCMMNAFIENGIPENPEMVVALMRKATITVGGYLLSATTIEHCILRLPYHWKLTFSQGAKNHEMSTRSIFGLELSEPLVTFALSCGTWSSPAVRVYSASQVENELEMAKREYLQAAVGISTSKFAIPKLFNWYLLDFAKDLESLLDWICLQLPSELGKEAINFLEKRKTEPLSQFVQIMPYEFSFRYLLCT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2614 547 PANTHER EXPRESSED PROTEIN 18 546 - -
Dere05g2614 547 MobiDBLite consensus disorder prediction 167 194 - -
Dere05g2614 547 Pfam Leucine-zipper of ternary complex factor MIP1 27 108 IPR025757 -
Dere05g2614 547 Coils Coil 24 58 - -
Dere05g2614 547 Pfam Protein of unknown function, DUF547 340 469 IPR006869 -
Dere05g2614 547 MobiDBLite consensus disorder prediction 1 34 - -
Dere05g2614 547 MobiDBLite consensus disorder prediction 125 235 - -
Dere05g2614 547 MobiDBLite consensus disorder prediction 140 158 - -
Dere05g2614 547 Coils Coil 77 104 - -
Dere05g2614 547 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2614 Dere-ChrDere05 37010605 37013785 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2614 05 37010605 37013785 Dere04g0236 04 2421030 2424879 CCT
Dere05g2614 05 37010605 37013785 Dere05g2614 05 37010605 37013785 ECH