Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0594 ATGCACATCAATCACAGTATACGTACTCTAGTTATCAGATGGAGATCAAATGGTGATCCGGAAGACAATGATCATCATGCAATGAAGGAGCAGAGAATGGGAACATATACATGATTTGGCCTTTCTCCAGAGTTGGGCATTCTTTATTTTTTGGTATTTGAAACATGTTTGGGCCAAGATGTCCAACTATGCCAGGATATGGAATACTTCACGGAGAGTGTTGAAGCTAGGAAAAAACAAACCACTGCCAGTGACGTCCAAAATAATCTGAAGCAAGAGATTTTGCAGCTTGAGAGAAGATTAGAACAGCAATTTGAGGTGCGATGCGCATTAGAAAGGGCACTTGGATACAAACCTTCATCTTCATCTTGTGTTGATTCAAATGAAATTATGATGCCTGAGCCAGCCACAAAACTAATAAAGGAAATTGCAGTGTTAGAGTTGGAAGTTGCGTATTTGGAGCAACATCTTCTATCTTTGTACCGTAAAGCATTTGACCAACAACTATCTTCTTCTGTATCTCCATCTGCAAAGGAGGAAAGATTAAAGTCTTCTTTAACGAATCCTAGTGCATTTCTTGAAGTTTCGAAGCCTGATAATTTTTCAAAAGGAGGATGTTCTGCAGCAAGATATAATGCTCACGAGCTTGAGATTCCAGCAAACGATCAATATAATGGAAATGAGTCAAAAGAAAAGCTGCTAGATTCCAGTGTGTTTCGTTGCCATTCCTCATTATCCCATTGTTCTGCAATCCCAAATAGAACATCTCCAGCAGAATCATTAGTTAAAGCTGTGTGTTCCTATCATTCCCGACAATTGTCCATGATGGAGTATTCTGAAACAGCTTCACCTAGTATTATCAGTCTGGCAGAACAACTTGGTACTCGCGTGAGTGACCATATCCCAGATACACCTAATAGGATTTCTGAGGAAATGGTGAAATGCATATCAGCTATATATTGCAAGCTTGCAGAGCCAACTATGACATATCAGGGCATACCATCCCCAAGTTCCTCTTTCTCATCAATGAGTGCCTTTTCTCTTGGAGATCAAGGTAATACTTGGAATTCAGGGTTTAGGAATAATCCCATCTTTGATGGAGGCTTAGACAATCCTTTCCAAGTGGAAGGGCTCCAGCAGGTTGGGCCCTACAGCTCCATGGTCCAAGTCTCATGGATTTACAGAGAAAGTCTGAAACTGGGTGACACAGAGCATTTGCTCCAAAACTTCAGGTCACTTATTTATCGTTTGGAAGAAGTAGATCCTGGGAAGTTGAAACATGAGGAAAAGCTAGCTTTTTGGATCAACATACACAATGCTTTGATGATGAACGCATTTTTGGCCCATGGGATTCCACAAAACAATATGAAAAGAGTTTCTATTCTTCTGAAGGCTGCATATAATGTTGGGGGTCAAACAATCACTGCAGACACAATACAGAATACTATCCTTGGATGCCGGATGCCTCGCCCCGGACAGTGGCTTCGGTTCTTCCTTTCTCCATGGACAAAGTTAAGAACTGGAGATGGACGTCAAGCATATGCAATTGAGCATCCTGAGCCTCTTCTACATTTCGCACTCTGTTCAGGAAACCATTCTGATCCAGCGGTACGAGTATATACAGCAAAGAGAGCGCTTGAAGAGCTAGAAGTTGCGAAAGAAGAGTACATTAGAGCTACGTTTGGGATACGAAAAGACCAGAAAATTGTTTTACCAAAGCTGGTTGAATCGTACGCCAAGGACTCAGGTCTGTCCCTTGTCGGTGTTATGGAGATTATCCGACAATGTCTGCCTCAATCCACCAGCAGCGTCTGCAAATATCAGATCAGTGCAAAATCACGAAAGAACATAGAGTGGATTCCACACAACTTTGCTTTTCGATATCTGATATCTAAGGATCTGGTGATGAGCTGA 1914 0.4169 MHINHSIRTLVIRWRSNGDPEDNDHHAMKEQRMGTYTXFGLSPELGILYFLVFETCLGQDVQLCQDMEYFTESVEARKKQTTASDVQNNLKQEILQLERRLEQQFEVRCALERALGYKPSSSSCVDSNEIMMPEPATKLIKEIAVLELEVAYLEQHLLSLYRKAFDQQLSSSVSPSAKEERLKSSLTNPSAFLEVSKPDNFSKGGCSAARYNAHELEIPANDQYNGNESKEKLLDSSVFRCHSSLSHCSAIPNRTSPAESLVKAVCSYHSRQLSMMEYSETASPSIISLAEQLGTRVSDHIPDTPNRISEEMVKCISAIYCKLAEPTMTYQGIPSPSSSFSSMSAFSLGDQGNTWNSGFRNNPIFDGGLDNPFQVEGLQQVGPYSSMVQVSWIYRESLKLGDTEHLLQNFRSLIYRLEEVDPGKLKHEEKLAFWINIHNALMMNAFLAHGIPQNNMKRVSILLKAAYNVGGQTITADTIQNTILGCRMPRPGQWLRFFLSPWTKLRTGDGRQAYAIEHPEPLLHFALCSGNHSDPAVRVYTAKRALEELEVAKEEYIRATFGIRKDQKIVLPKLVESYAKDSGLSLVGVMEIIRQCLPQSTSSVCKYQISAKSRKNIEWIPHNFAFRYLISKDLVMS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0594 637 Coils Coil 87 107 - -
Dere13g0594 637 Pfam Leucine-zipper of ternary complex factor MIP1 85 167 IPR025757 -
Dere13g0594 637 PANTHER UNCHARACTERIZED 75 634 - -
Dere13g0594 637 Pfam Protein of unknown function, DUF547 424 557 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0594 Dere-ChrDere13 7365766 7371268 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0236 04 2421030 2424879 Dere13g0594 13 7365766 7371268 CCT
Dere13g0594 13 7365766 7371268 Dere13g0594 13 7365766 7371268 ECH