Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0074 ATGGATCAGCTAACACTATTCTTTCCGTTTCTATTAACGCTTCACCTATCCGTATCAGGAGTAATTTCAACGACATTCACGATGGTTAACAAATGCGACTACACAGTATGGCCAGGTATTCTTTCAAACGCTGGAGTTGCTCCACTTTCATCCACCGGTTTTGTTCTTCAAACGGGTGAGTCTAAGACCATCTCCGCACCCGCTTCTTGGGGTGGCCGCTTCTGGGGTCGAACGCAATGCACACAGGACTCCACCGGCAAGTTCTCCTGCGTCACCGGCGACTGTGGCTCCGGAAAGCTGGAATGCGGAGGCAAAGGAGCCACACCGCCTGCGACGTTGGCGGAATTCACTTTAGACGGAGCCGGAGGGCTTGATTTCTTCGATGTGAGCTTGGTAGACGGATACAACGTGCCTATGATGGTCGTTCCTCAAGGTGGTACCGGAGAGAACTGCACGAGCACGGGTTGCGTGTCGGATCTGAACAGCGCGTGCCCTTCAGAGCTCAAGTTGATGAGCGTGGATGGGAAAGAAGGGGTGGCGTGCAAGAGCGCTTGCGAGGCATTTGGATCGCCGCAGTACTGCTGTAGTGGCGCGTATGGATCACCGAACACCTGCAAGCCATCGTCTTACTCCCAGATATTCAAGAGCGCTTGCCCACGCGCCTACAGCTATGCGTACGACGACAAGACGAGCACATTCACATGTGCGTCTGCGGATTATAACATCACCTTTTGTCCATCCCCCAACACCAGTCAGAAAGCTTCGCAGGGAGAAGACACCAAATCGGAAAGTGCGCCTTCTGCTCCAAGCTCGGCCATGGTGGACAACAGCAACATGGTGTACGAAGGTGCATGGGATGAAAGTGAGATATCATCGGGCACGTGCGTGCACGTGTTCCAATCCCAAGTCATTGCGGGCATAATGAGCTTTACAGTGGCCGTTTGGCGCTTCTCCCAGCTCCTGTAG 966 0.5373 MDQLTLFFPFLLTLHLSVSGVISTTFTMVNKCDYTVWPGILSNAGVAPLSSTGFVLQTGESKTISAPASWGGRFWGRTQCTQDSTGKFSCVTGDCGSGKLECGGKGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMMVVPQGGTGENCTSTGCVSDLNSACPSELKLMSVDGKEGVACKSACEAFGSPQYCCSGAYGSPNTCKPSSYSQIFKSACPRAYSYAYDDKTSTFTCASADYNITFCPSPNTSQKASQGEDTKSESAPSAPSSAMVDNSNMVYEGAWDESEISSGTCVHVFQSQVIAGIMSFTVAVWRFSQLL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0074 321 PANTHER OS03G0233200 PROTEIN 12 246 IPR001938 -
Dere04g0074 321 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Dere04g0074 321 CDD TLP-PA 25 245 - -
Dere04g0074 321 Gene3D Thaumatin 24 246 IPR037176 -
Dere04g0074 321 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Dere04g0074 321 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Dere04g0074 321 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Dere04g0074 321 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Dere04g0074 321 SMART tha2 26 246 IPR001938 -
Dere04g0074 321 PIRSF PR5 2 283 IPR001938 -
Dere04g0074 321 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Dere04g0074 321 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Dere04g0074 321 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Dere04g0074 321 Pfam Thaumatin family 30 246 IPR001938 -
Dere04g0074 321 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0074 Dere-ChrDere04 814554 816230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0074 1 247 Receptor kinase-like Gene Family AT5G38280 54.800 5.39e-95 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0074 04 814554 816230 Dere04g0074 04 814554 816230 ECH
Dere13g0747 13 9350172 9353899 Dere04g0074 04 814554 816230 ECH
Dere06g0102 06 1128304 1131310 Dere04g0074 04 814554 816230 ECH