Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0108 ATGAGGTTTTACGTGGAAGACTCCAGGTTGGATCAGAACTATTTGGTGGTGATCATCCAACTGTGGCGCAAGCCAATCCTAGGCAGCAACAAGGTCATTGGACAAGTTTGTGTCCCTCTCAAACAACTTTTTGACGATTCTGGTGGCATCAATACCACCAACTATAATTGTCATCAAGTGGTCATGGAACCCTCCGGGAAGCGACGTCGTCAGGTTTTTATATATTTCACCTTTGGGTTTGGCGAGACCGTCAGAGCAGCGGCATCATCAGACAAGGTTGATAGTATTAGTAGTCCAATGGCGTCAAGACTCCATGTCCGGCCTTCCCCATCTGCGCCGGGCCTTGTTGCCATCATCACAATCCAAGTTATCTTCTTCTCAAAATTAGGAATTCCTCTAGTGCAAATGGCACACCCTCCGCAAACCCTTATGGCCCCCGACTCTGAACCTGATGAAACTCCTCCTCCAGGTCCCCTTTCTCCTCCGACTCCGAACCCCACTACTCCCAACCGCATGACGAATCCGGATTCGACCCGAATTGCGACCCTCCTCCATCTTTCCTTCAATCAGGACTCCGGTTGCTTCGCCGCGGGCACGGATCGTGGTTTCCGGATCTACAATTGCGATCCGTTCCGCGAGATCTTTCGGCGGGACTTTGGTCCAGGTGGTGGAATTGGTTTGGTTCAGATGTTGTTTCGGTGCAACATACTTGCTTTCGTCGGTGGTGGGGCTGACCCAATTTACCCCAGTAACAAGGTGATGATTTGGGATGACCATCAGTCCCGGTGCATCGGCGAACTATCATTTCGATCGGAGGTCAAAGGAGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTTGTATATAATTTTGCAGATCTTAAAGTGTTGCACCAAATTGAGACAACGGCCAATCCAAAGGGACTTTGTGAGGTTTCGCATGTTTCAGGGACAATGGTGTTGGTCTGTCCTGGGTTGCAGAAGGGTCAGGTGAGGGTAGAGCATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCATGATTCTAGAATAGCTTGCTTCGCGCTTACGCAGGATGGACGGTTGCTTGCCACCGCAAGCAGCAAGGGAACTCTGGTTAGGGTTTTCAATACTTTGGACGGTTCATTGCTCCAAGAGGTAAGGAGAGGTGCAGACCGAGCAGAGATATACAGCCTTGCTTTTTCTGCTACTGCACAATGGCTTGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAACCTGAAGGTTGATTCAGGACTACTGGGGCATGACAGAGTGCATAGTGCATCTGAATCTAATCCTGCTAACCCATCAGCAGTTTCATCTCTTTCATTTATCAAAGGTGTGCTGCCCAAGTATTTTAGCTCAGAATGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGGTTGCAATATATTGTTGCCTTTGGTCATCAAAAGAACTCAATTGTAATACTTGGGATGGACAGAAGCTTCTATCGATGCCAGTTCGACCCGGTTAATGGTGGAGAGATGAGCCAAGTGGAATATTATAACTTCTTGAGGCCAGAAGAAACATTCTAG 1599 0.4828 MRFYVEDSRLDQNYLVVIIQLWRKPILGSNKVIGQVCVPLKQLFDDSGGINTTNYNCHQVVMEPSGKRRRQVFIYFTFGFGETVRAAASSDKVDSISSPMASRLHVRPSPSAPGLVAIITIQVIFFSKLGIPLVQMAHPPQTLMAPDSEPDETPPPGPLSPPTPNPTTPNRMTNPDSTRIATLLHLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRRDFGPGGGIGLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKVLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGHDRVHSASESNPANPSAVSSLSFIKGVLPKYFSSEWSVAQFRLHEGLQYIVAFGHQKNSIVILGMDRSFYRCQFDPVNGGEMSQVEYYNFLRPEETF 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0108 532 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 181 525 - -
Dere02g0108 532 SMART WD40_4 173 207 IPR001680 GO:0005515
Dere02g0108 532 SMART WD40_4 342 382 IPR001680 GO:0005515
Dere02g0108 532 SMART WD40_4 385 426 IPR001680 GO:0005515
Dere02g0108 532 SUPERFAMILY WD40 repeat-like 181 428 IPR036322 GO:0005515
Dere02g0108 532 FunFam Autophagy-related protein 18a isoform A 181 511 - -
Dere02g0108 532 Pfam WD domain, G-beta repeat 395 426 IPR001680 GO:0005515
Dere02g0108 532 Gene3D - 180 503 IPR015943 GO:0005515
Dere02g0108 532 MobiDBLite consensus disorder prediction 141 176 - -
Dere02g0108 532 MobiDBLite consensus disorder prediction 149 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0108 Dere-ChrDere02 1093283 1098455 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3287 01 47642738 47643859 Dere02g0108 02 1093283 1098455 CCT
Dere02g0108 02 1093283 1098455 Dere02g0108 02 1093283 1098455 ECH
Dere01g3382 01 48438742 48443467 Dere02g0108 02 1093283 1098455 ECH