Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3382 ATGAATTCATGTTTTGAATTTAGGAATTTAAGTGCTTTGGTCTATAATATTAATATGACAAAACCATTTCTTACTCTGTTCTTTCATTTCTCCTTTGTCTTTTGGTTTATTGCTTATGTTGTGTATTGTATTTACCTTCTAAAGGACTTTTCGAGGAAATCTATTAGATTTGCACTGTGTTACCCGCAGTTCCAATGTGAGGGCAACTCTCAATCCTCCAGGTTTGCGTCATCCATGGCCACCCTCTCTGCTAGCTCTTCACCTCCCTGGCGAAACCCTGATCCTAATTCTGATACTAATCTTGAATTTCAAGCAGACCAATTACAAACCCTCGACTTGGATTCCATTGAACCTCGCCAATCGACCCTATCTCGCCGTCACGACTTTTCCGATGACTCCCCTTCTCATCAAAATCACCCTAATAGTTCACCGGAGTCTCCTGCTCCGACGTCCCCTCCTTCTCTGCTTCACCTCTCTTTCAACCAAGAGCAAGCTTGCTTTGCCGCCGCCACTGACAACGGGTTCCGTATCTACAATTGTGACCCATTTCGGGAGCTCTTCCGCAGAGAGTTCGATGGAGGCGGTGGCAGTACTGGGGGAATTGGGCACGTGGAGATGCTCTTTCGCTACAATATGCTGGCACTGGTAGGAGGTGGCTCCCATCCTCAGTACCCTCCCAACAAGGTGATGATCTGGGACGATCATCAGGGCAGGTGCGTTGGTGAGCTTTCGTTCCGGTCAGCTGTTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGGAGAGCAGAAGATATTCGTGTATAATTTCGCGGACCTCAAATTACTTCATCAGATGGAAACCATTGCAAACGCGAAGGGGCTCTGCGCAGTTTCGCAATTGGCTGATTCTATGGTATTGGCGTGCCCGGGTTTGCATAAAGGTCAGATTCGAGTTGAGCATTACGCTCAGAAAAAAACCAAGTTCATTTCGGCTCATGATTCAAGAATAGCTTGTTTCGCTCTGACACTTGATGGAATGTTTCTCGCCACCGCCAGCACCAAGGGTACTCTAATCCGAATCTTTGATACAGCTAATGGCACGCTACTTCAAGAAGTAAGAAGGGGTGCAAATGCAGCAGAGATCTATAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGGTAATTCTAGTCGTCCCGAGCATGAAAAATCGCAGACTGCAACCAATTCTTATGCTGTCATTACACCGTCTAGCTCACCTCTTGCATTCATCAAATTTAAAGGAGTGTTACCCAAGTATTTTAATTCAGAGTGGTCAGTTGCTCAGTTTCACTTACAGGAGGGCACTCATTACACTGTTGCGTTTGGTCACCAAAAGAATACAGTCATAATTCTTGGCATGGATGGGAGCTTCTACCGATGTCAATTCGACCCAGTGCATGGTGGTGAGATGACTGAGCTGGAATATCATAACTTCTTGAAGCCAGAGACAACCTTGTGA 1533 0.4605 MNSCFEFRNLSALVYNINMTKPFLTLFFHFSFVFWFIAYVVYCIYLLKDFSRKSIRFALCYPQFQCEGNSQSSRFASSMATLSASSSPPWRNPDPNSDTNLEFQADQLQTLDLDSIEPRQSTLSRRHDFSDDSPSHQNHPNSSPESPAPTSPPSLLHLSFNQEQACFAAATDNGFRIYNCDPFRELFRREFDGGGGSTGGIGHVEMLFRYNMLALVGGGSHPQYPPNKVMIWDDHQGRCVGELSFRSAVRGVRLRRDRIIVVGEQKIFVYNFADLKLLHQMETIANAKGLCAVSQLADSMVLACPGLHKGQIRVEHYAQKKTKFISAHDSRIACFALTLDGMFLATASTKGTLIRIFDTANGTLLQEVRRGANAAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKGNSSRPEHEKSQTATNSYAVITPSSSPLAFIKFKGVLPKYFNSEWSVAQFHLQEGTHYTVAFGHQKNTVIILGMDGSFYRCQFDPVHGGEMTELEYHNFLKPETTL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3382 510 SUPERFAMILY WD40 repeat-like 152 410 IPR036322 GO:0005515
Dere01g3382 510 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 151 503 - -
Dere01g3382 510 SMART WD40_4 236 271 IPR001680 GO:0005515
Dere01g3382 510 SMART WD40_4 361 402 IPR001680 GO:0005515
Dere01g3382 510 SMART WD40_4 318 358 IPR001680 GO:0005515
Dere01g3382 510 MobiDBLite consensus disorder prediction 122 155 - -
Dere01g3382 510 Pfam WD domain, G-beta repeat 371 401 IPR001680 GO:0005515
Dere01g3382 510 FunFam Autophagy-related protein 18a isoform A 153 489 - -
Dere01g3382 510 Gene3D - 153 492 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3382 Dere-ChrDere01 48438742 48443467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3382 01 48438742 48443467 Dere01g3382 01 48438742 48443467 ECH
Dere01g3382 01 48438742 48443467 Dere02g0108 02 1093283 1098455 ECH