Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3287 ATGTCAGTTGCAGCAGTTGAGAGTATTGCATCCTTAAGTAGTGATCTCTTCTATGACATATTACGACGTCTTGATGGTCCAACTTTGGCTAGTGCTGCATGTACTTGTGCAGCATTCTGTTCCATTTCAAAAGAAGAGAGCTTATGGGAAAATGTATGTTCATCTATGTGGCCATCAACCAATAGGGAGGATGTCAAAAGTTTAATATCTTCTATTGGTGGGTTCAGAAAATTCTATGCGGATTGTTTTCCACTTATTGTAAATAAGGAGGTTGTGGAGTATCAACCAAATTGCTATCTTGAGTATCCTGAAGACTGGACTGAGGCTGAGTATTATGGAGATTTGAATGATTCTGATAGTATCTCTCCGTCAGATTTTGTTTCCATTGTAGATATCAAGTATAAAGAGAAGCCAATCTGCTCGAAGGTTTTATGGGGAATTCCAAATGCAAGTGGCTTCAATGGTTGGTTTTACAACTGCCCTTTCCGGATTGATCTTCTCACTTTTGCAGATAGAGATGATAATAATGATGGAGTAGTTACCCTTTCTGCATCTGATGGTCTACCACCAATTATATCCATGGAAAGAGAGAGGAAAGACGGGAAGCTATGGCAGGAGCTTCGTGACGGGCTCCAGCTTAGTTGGATAATCGTAAACAGGAAAATGAAGCAGGCTGCTAATCTTGCTAGCTGGAGTCCTCTTGGTGGTCAAAGACATTGGCCAACAGATAAGGATTTTGTCATACGTTTTGGGTCAGTTCTTCCTGCTAAGGACATTCTTCCATGTCAAGTAGTGGAATGCATCCTTATTATGAAGCTCAGAATGGTTAGCAGTGAAGAGGAGGGAGCCCAAACAACTCTTAGATTAACAGAGCTGAGCATGCAATTGGAAGACATGGAAGGAGCTCATGTTAATGGAAGAAACAGCTTGCTTATTCTTAAGGAAGCTCTTAGCTGCAGAAGGAGTAAAAATTATAGTGAAGTACTTGAGTCTTGTCATATGTACTCAAAAGTGCAGAATGAGTTAAAAGAGGAGAAGATGAGAAACGAGAGTAGGTTGGATAGACTTTGTATATTAAGTGGCATTGCTGCTTTTATGACATTCTGGTACTGCGTTTTGTGA 1122 0.4037 MSVAAVESIASLSSDLFYDILRRLDGPTLASAACTCAAFCSISKEESLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPLIVNKEVVEYQPNCYLEYPEDWTEAEYYGDLNDSDSISPSDFVSIVDIKYKEKPICSKVLWGIPNASGFNGWFYNCPFRIDLLTFADRDDNNDGVVTLSASDGLPPIISMERERKDGKLWQELRDGLQLSWIIVNRKMKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILIMKLRMVSSEEEGAQTTLRLTELSMQLEDMEGAHVNGRNSLLILKEALSCRRSKNYSEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3287 373 Gene3D - 2 95 - -
Dere01g3287 373 SUPERFAMILY F-box domain 8 79 IPR036047 GO:0005515
Dere01g3287 373 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Dere01g3287 373 PANTHER F-BOX PROTEIN-RELATED 4 370 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3287 Dere-ChrDere01 47642738 47643859 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3287 01 47642738 47643859 Dere02g0108 02 1093283 1098455 CCT
Dere01g3287 01 47642738 47643859 Dere01g3287 01 47642738 47643859 ECH