Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0014 ATGGCTCCTGATATCACTACCGCAGCTGCCAACGCCACCGCCCAGCAGGCCAAGGCCAACGGGAGGGGCCGTGCCTTCGTTACTTTCCTGGCCGGCAACGGTGACTACGTAAAGGGTGTGGTGGGGCTAGCCAAAGGTCTTAGGAAGGTCAAGAGCAAGTACCCTCTGGTGGTTGCTATCTTGCCCGATGTTCCTCCCGAGCACCGTCAGATTCTGATCGACCAAGGTTGCATCGTCCGGCAGATTGAGCCTGTCTACCCTCCCGAGAACCAAACCCAGTTCGCCATGGCTTATTACGTCATCAATTACTCCAAACTTCGTATCTGGGAGTTCGTGGAGTACGGCAAGATGATCTATCTTGATGGAGACATCCAAGTGTTTGAGAACATAGACCACCTTTTTGATCTGCCAAACGATTACTTCTACGCTGTGATGGACTGTTTCTGCGAGAAAACTTGGAGTCACACCCCACAGTACAAGATCGGATACTGCCAGCAGTGCCCCGATAAGGTTCAGTGGCCCTCTGAGTTTGGACCCAAGCCTCCACTTTATTTCAACGCCGGGATGTTCGTTTACGAGCCCAATCTCTCCACCTACTATGACCTCCTCAGAACCCTCCAAGTCACCAAGCCTACATCCTTTGCCGAACAGGATTTTCTGAACATGTACTTCAAAGGCAAATACAGGCCCATTCCCAATATTTACAACCTTGTGTTGGCCATGTTGTGGCGTCATCCTGAGAACGTTGAGCTTCACAAAGTGAAAGTGGTTCACTACTGTGCTGCTGGTTCTAAGCCATGGAGGTACACAGGGAAAGAGGAAAACATGGACAGGGAAGATATCAAGATGTTGGTGAAGAAATGGTGGGAAATATACGAGGATGAGACGTTGGACTATGAGAGTCCAGTGAATGTGGAGCGTCTCAAGGAGGCTATGTCGGAGGCACCTCATGTTGCCTTCATTCCCGCCCCATCCGCAGCTTAA 984 0.5091 MAPDITTAAANATAQQAKANGRGRAFVTFLAGNGDYVKGVVGLAKGLRKVKSKYPLVVAILPDVPPEHRQILIDQGCIVRQIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYGKMIYLDGDIQVFENIDHLFDLPNDYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPSEFGPKPPLYFNAGMFVYEPNLSTYYDLLRTLQVTKPTSFAEQDFLNMYFKGKYRPIPNIYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWEIYEDETLDYESPVNVERLKEAMSEAPHVAFIPAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0014 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 300 IPR029044 -
Dere02g0014 327 FunFam Hexosyltransferase 22 300 - -
Dere02g0014 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 298 - -
Dere02g0014 327 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Dere02g0014 327 CDD GT8_Glycogenin 24 294 - -
Dere02g0014 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0014 Dere-ChrDere02 133580 135046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0014 1 327 Glycosyltransferase AT1G56600 73.591 0.0 524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3659 01 50843137 50847912 Dere02g0014 02 133580 135046 CCT
Dere02g0014 02 133580 135046 Dere02g0014 02 133580 135046 ECH
Dere01g3526 01 49642299 49643801 Dere02g0014 02 133580 135046 ECH