Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3659 ATGAAGGATTTGGCAAGAACTTTTGTTGGAGTTCTTGGTAATGACAAGGCTAGAAAGCAAGTATTCAACATCTCAGGAGAGAGGTGTGTCACACTTGGTGGATTAGCAAGAGCGAATGCCCAGCATTTCTTTGAATCAATTGACGAGGCAAAGAGTGGAGAAACCTACCGGAAAAAGCCTTACAAGGAGATACTGGGCTTTCGACACGCAGAGGATTTCACTGGGCCCTACCAGAAAATAAATTTAGACGTGGAAAAGTGCAACCTCAACGTGCCACGTGGAGTCACCATTTACGTGGCGACTCATAACGGTTGGCCTACTAAGATGGCACCTGATATCACCACCGCTGCTGCCAACGCCGCCGCTGCACAAGCCAAGGCTAACGGCAGACTCGGCCGTGCCTATGTTACATTCCTCGCCGGTGACGGTGATTACGTGAAGGGCGTGGTTGGTTTAGCCAAGGGTCTTAGGAAGGTCAAGAGTATCTACCCGTTGGTAGTTGCTGTTTTGCCCGACGTTCCCGAGGAGCACCGCAAGATTCTGATCTCCCAAGGTTGCATTGTCAAGGAGATTGAGCCAGTGTACCCACCGGAGAACCAAACCCAGTTCGCCATGGCCTACTATGTTATCAATTACTCCAAGCTTCGTATCTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGACGGAGACATCCAAGTGTTTGACAACATCGACCACCTTTTTGATCTGCCGAACGACTATTTCTACGCGGTGATGGACTGCTTCTGCGAGAAGACATGGAGCCACTCCCCACAGTACCAGATTGGGTACTGCCAGCAGTGCCCTGATAAGGTTTCGTGGCCCTCTAATTTAGGACCCAAGCCACCCCTCTATTTCAACGCTGGCATGTTCGTTTTTGAGCCTAATCTTTCCATTTACAACGACCTCCTCAAAACTCTCCAAGTCACGAAGCCTACCTCCTTCGCTGAACAGGACTTTCTGAACATGTACTTTAAGGACAAATACAGGCCCATATCTAACGTGTACAACCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTATGCTCGACAAAGTCAAAGTGGTTCACTACTGTGCTGCTGGGTCAAAACCTTGGAGGTACACTGGGAAAGAAGTGAACATGGACAGGGAAGACATCAAGATGCTGGTGAAGAAATGGCGGGATATATATGAAGATGAGACATTGGACTATGAAAATCCTGTGAATGTGGAACGTATCACGGGTGCATTAACGGAGGCTGGTGGTGTTATGTATCGTCCAGCCCCATCCGCCGCATAG 1311 0.4905 MKDLARTFVGVLGNDKARKQVFNISGERCVTLGGLARANAQHFFESIDEAKSGETYRKKPYKEILGFRHAEDFTGPYQKINLDVEKCNLNVPRGVTIYVATHNGWPTKMAPDITTAAANAAAAQAKANGRLGRAYVTFLAGDGDYVKGVVGLAKGLRKVKSIYPLVVAVLPDVPEEHRKILISQGCIVKEIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPNDYFYAVMDCFCEKTWSHSPQYQIGYCQQCPDKVSWPSNLGPKPPLYFNAGMFVFEPNLSIYNDLLKTLQVTKPTSFAEQDFLNMYFKDKYRPISNVYNLVLAMLWRHPENVMLDKVKVVHYCAAGSKPWRYTGKEVNMDREDIKMLVKKWRDIYEDETLDYENPVNVERITGALTEAGGVMYRPAPSAA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3659 436 PANTHER GLYCOGENIN SUBFAMILY MEMBER 115 403 - -
Dere01g3659 436 CDD GT8_Glycogenin 133 403 - -
Dere01g3659 436 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 132 409 IPR029044 -
Dere01g3659 436 FunFam Hexosyltransferase 131 409 - -
Dere01g3659 436 Pfam Glycosyl transferase family 8 137 379 IPR002495 GO:0016757
Dere01g3659 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 135 407 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3659 Dere-ChrDere01 50843137 50847912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3659 109 436 Glycosyltransferase AT1G56600 75.444 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3659 01 50843137 50847912 Dere02g0014 02 133580 135046 CCT
Dere01g3659 01 50843137 50847912 Dere01g3659 01 50843137 50847912 ECH