Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3526 ATGGCTCCAGAACTCGTTCCCACCGCCGTGAAATCCAGTGGCTTCACCAGACCAGCGAGCCTGCCGAGTCGCGCTTATGTCACGTTTCTGGCTGGAAATGGGGACTACGTGAAAGGCGTGGTTGGTCTGGCAAAGGGATTGAGGAAGGCGAAGACGGCTTACCCATTGGTGGTGGCCGTCCTCCCCGACGTGCCGGAGGAGCACCGTCGGATCTTGGAGTCCCAGGGCTGCATCGTCCGTGAGATCGAACCCGTCTATCCACCCGAGAACCAGACTCGATTTGCAATGGCCTATTACGTCATCAACTACTCCAAGCTCCGTATATGGGAGTTTGTTGAGTATAGCAAAATGATATACTTGGACGGAGACATCCAGGTGTTTGACAACATAGACCACCTCTTCGACCTGCCGGACGGACACTTTTACGCCGTGATGGACTGCTTCTGCGAGAAGACATGGAGCCACACCCCACAATACAAGGTCGGGTACTGCCAGCAATGCCCGGAGAAGGTGAAGTGGCCGGCGGAGATGGGTGAACCCCCTGCCCTGTATTTCAACGCCGGCATGTTTGTGTTCGAGCCTAACATGGAGACATACCATGATCTCTTGAAAACACTCCAAATCACTCCGCCCACCCCTTTTGCCGAGCAAGACTTCTTGAACATGTACTTCAAGCCCATCTACAAGCCAATTCCCTTGATCTACAACCTCGTCCTTGCAATGCTGTGGCGCCACCCAGAGAATGTGGACCTTGATCGAGTCAAAGTTGTTCATTATTGTGCTGCGGGATCGAAGCCGTGGAGGTATACGGGGAAGGAAGAGAACATGGATAGAGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTACAATGACGAATCCTTGGATTACAACAAGGGCAGGAGTGGTGTGGAAGGAGATGCGGAGCCAGTGAACATGGGACCATTCATAGCCGCGTTGTCCGAGGCTGGTCAACTTCAATACATCGCTGCCCCCTCAGCTGCTTAA 1014 0.5316 MAPELVPTAVKSSGFTRPASLPSRAYVTFLAGNGDYVKGVVGLAKGLRKAKTAYPLVVAVLPDVPEEHRRILESQGCIVREIEPVYPPENQTRFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVKWPAEMGEPPALYFNAGMFVFEPNMETYHDLLKTLQITPPTPFAEQDFLNMYFKPIYKPIPLIYNLVLAMLWRHPENVDLDRVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYNKGRSGVEGDAEPVNMGPFIAALSEAGQLQYIAAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3526 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Dere01g3526 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Dere01g3526 337 FunFam Hexosyltransferase 22 300 - -
Dere01g3526 337 CDD GT8_Glycogenin 24 294 - -
Dere01g3526 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
Dere01g3526 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3526 Dere-ChrDere01 49642299 49643801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3526 1 337 Glycosyltransferase AT1G56600 75.652 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3526 01 49642299 49643801 Dere01g3526 01 49642299 49643801 ECH
Dere01g3526 01 49642299 49643801 Dere02g0014 02 133580 135046 ECH