Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00177 ATGAGCTATGCACATTATCATATGGGCTCTGGTAGTAGAACTGCTAGGAGAAGTTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAGACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGCTCATATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAGTGGATTTGCCCAACTGCTCCTACCCGCCCTGTAACCATACTTGGTGGTTTTTCTTGCACTGCATGGTTTGATATGGGAGAACTTTCAGAAGATGGTCCAGATGATTGGGAGGGTTTAGACGCCTCAGCAGCACATATTGCCAACTTGTTGTCTACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAGTAGCTCAATATTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCTTACCCTGTCAACTTAAGAGCAGTTGTTGGACTGAGTGGCTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATTGAAGTGTCACATGAAGCCAGAAGGCGAGCTGCTTCCTTACCTGTTTTCTTGAGCCATGGAATCAGTGATGATGTAGTCCTCTGCAAATACGGAGAGAAATCAGCTCAATCCTTAACAGGGTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCATTATACTGTTCCTAGGGAGATGGATGAGGTTTCCAATTGGCTTAACTCAAGGCTGGGGCTAGGGGGATCCTCATGA 765 0.4601 MSYAHYHMGSGSRTARRSLEFGKTHVVRPKGRHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSHEARRRAASLPVFLSHGISDDVVLCKYGEKSAQSLTGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00177 254 Gene3D alpha/beta hydrolase 15 249 IPR029058 -
Cca11g00177 254 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 253 - -
Cca11g00177 254 SUPERFAMILY alpha/beta-Hydrolases 25 248 IPR029058 -
Cca11g00177 254 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 253 - -
Cca11g00177 254 Pfam Phospholipase/Carboxylesterase 24 245 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00177 Cca-Chr11 2136806 2140391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00177 1 253 Acyl Lipid Metabolism Gene Families AT3G15650 71.698 1.01e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00177 K06130 - gmx:100782153 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00177 11 2136806 2140391 Cca10g00126 10 1228690 1232464 ECH
Cca03g00754 03 16124863 16139459 Cca11g00177 11 2136806 2140391 ECH
Cca11g00177 11 2136806 2140391 Cca11g00177 11 2136806 2140391 ECH
Cca10g00126 10 1228690 1232464 Cca11g00177 11 2136806 2140391 PCT