Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00754 ATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGAAGAACGTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACAATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCGCAGCTCTTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCAACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCTACTGCTTGGTTTGATGTTGGAGAGATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCAAATTTGTTGTCTACAGAGCCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGCATGGGAGCAGCTACTGCCCTGTACTCCGCGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCAGCCAACCTAAGCGCAGTTGTTGGCTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAGGTTACAAGGGGTAGATGAAGCTGCAAGGCGTGCTCAATCCTTTCCCGTGTTGCTGTGTCATGGAAAAGGTGACGATGTGGTTCCTTATAAATTTGGTGAGAAATCATCAAAGTCCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAATCCTATAATGGGCTTGGACATTACACAGTTCCGGAAGAGATGGATGAGGTTTGTGCTTGGCTAACGTCAAAATTGGGCCTTGAGGGAAATACTGCTTAG 777 0.4569 MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGEISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSASCFTAGKYGNGNPYPANLSAVVGLSGWLPCSKTLSNRLQGVDEAARRAQSFPVLLCHGKGDDVVPYKFGEKSSKSLSSTGFQDVTFKSYNGLGHYTVPEEMDEVCAWLTSKLGLEGNTA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00754 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Cca03g00754 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Cca03g00754 258 Gene3D alpha/beta hydrolase 17 252 IPR029058 -
Cca03g00754 258 Pfam Phospholipase/Carboxylesterase 26 247 IPR003140 GO:0016787
Cca03g00754 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00754 Cca-Chr3 16124863 16139459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00754 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 74.510 3.00e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00754 K06130 - gmx:100796190 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00754 03 16124863 16139459 Cca11g00177 11 2136806 2140391 ECH
Cca03g00754 03 16124863 16139459 Cca10g00126 10 1228690 1232464 ECH
Cca03g00754 03 16124863 16139459 Cca03g00754 03 16124863 16139459 ECH